RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 CPNE6O95741 557 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 TSPAN12O95859 305 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 INHBBP09529 407 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 CDH1P12830 882 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 PKMP14618 531 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 MRPL19P49406 292 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 DGKQP52824 942 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ILF2Q12905 390 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 NFATC3Q12968 1075 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 PRKG2Q13237 762 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 RAB33AQ14088 237 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 DLEU7Q6UYE1 221 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 GAREM2Q75VX8 874 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 STK32CQ86UX6 486 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ZFAND4Q86XD8 727 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 BBS7Q8IWZ6 715 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 RBM12BQ8IXT5 1001 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 BPIFB6Q8NFQ5 453 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 OR56A4Q8NGH8 313 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 YTHDF1Q9BYJ9 559 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 TRMT6Q9UJA5 497 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 PKP3Q9Y446 797 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 GBF1Q92538 1859 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 A0A1W2PRU2 124 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 TRIM64BA6NI03 449 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 KLK8O60259 260 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 VPS26AO75436 327 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ZBTB11O95625 1053 aaPredicted RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 G6PDP11413 515 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 CCNA2P20248 432 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 CA5AP35218 305 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ALDH3A2P51648 485 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 BMXP51813 675 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 PRMT2P55345 433 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ERVPABLB-1P60509 514 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 FXNQ16595 210 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 EFL1Q7Z2Z2 1120 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 SFRP1Q8N474 314 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 NKAPQ8N5F7 415 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 CLDN19Q8N6F1 224 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 HJURPQ8NCD3 748 aaPredicted RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 PDPRQ8NCN5 879 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ITFG1Q8TB96 612 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 TUBA1CQ9BQE3 449 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 C1QTNF3Q9BXJ4 246 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ADNPQ9H2P0 1102 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 IL21Q9HBE4 155 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 RIC8BQ9NVN3 520 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 MAGEL2Q9UJ55 1249 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 PCDHB3Q9Y5E6 796 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 COMMD10Q9Y6G5 202 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 C5orf42Q9H799 3197 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 J3QRK9 145 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 GREM1O60565 184 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 ALPLP05186 524 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 NFKBIAP25963 317 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 HTR6P50406 440 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 IST1P53990 364 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 GRSF1Q12849 480 aaKnown RBP eCLIP12.29□□□□□ -0.44
RNF4-222ENST00000541204 DAG1Q14118 895 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 CRY1Q16526 586 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 C18orf21Q32NC0 220 aaPredicted RBP12.29□□□□□ -0.44
RNF4-222ENST00000541204 LETMD1Q6P1Q0 360 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 C16orf87Q6PH81 154 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 TXNDC11Q6PKC3 985 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 TTC30BQ8N4P2 665 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 FAM86B1Q8N7N1 296 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 PNPT1Q8TCS8 783 aaKnown RBP12.29□□□□□ -0.44
RNF4-222ENST00000541204 SNX19Q92543 992 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 FBXL8Q96CD0 374 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 BOCQ9BWV1 1114 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 TBX21Q9UL17 535 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 TGM5O43548 720 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 CNPP09543 421 aaKnown RBP12.29□□□□□ -0.44
RNF4-222ENST00000541204 THRBP10828 461 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 IL7RP16871 459 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 MTHFRP42898 656 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 TTPAP49638 278 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 ARMC12Q5T9G4 340 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 XAF1Q6GPH4 301 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 IL27RAQ6UWB1 636 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 LEMD2Q8NC56 503 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 DDHD1Q8NEL9 900 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 MYO19Q96H55 970 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 CEP295NLQ96MC4 621 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 LHPPQ9H008 270 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 ACTL8Q9H568 366 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
RNF4-222ENST00000541204 OR51B4Q9Y5P0 310 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 SLC30A1Q9Y6M5 507 aa12.29□□□□□ -0.44
RNF4-222ENST00000541204 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
RNF4-222ENST00000541204 C1orf232A0A0U1RR37 186 aa12.28□□□□□ -0.44
RNF4-222ENST00000541204 DEAF1O75398 565 aaPredicted RBP12.28□□□□□ -0.44
RNF4-222ENST00000541204 CAPN1P07384 714 aa12.28□□□□□ -0.44
RNF4-222ENST00000541204 RAP2AP10114 183 aa12.28□□□□□ -0.44
RNF4-222ENST00000541204 CD70P32970 193 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms