RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	WBP1	Q96G27	269 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	SGSM3	Q96HU1	749 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	FERD3L	Q96RJ6	166 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	ULBP3	Q9BZM4	244 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	XKR8	Q9H6D3	395 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	MVB12B	Q9H7P6	319 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	IL17B	Q9UHF5	180 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	ICK	Q9UPZ9	632 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	COLEC10	Q9Y6Z7	277 aa		13.26	□□□□□ -0.29
POLE-215	ENST00000540987	EIF4E1B	A6NMX2	242 aa	Known RBP	13.25	□□□□□ -0.29
POLE-215	ENST00000540987	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.25	□□□□□ -0.29
POLE-215	ENST00000540987	KIAA0754	O94854	1291 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	OR56A5	P0C7T3	313 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	ITGB6	P18564	788 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	MAP4	P27816	1152 aa	Known RBP	13.25	□□□□□ -0.29
POLE-215	ENST00000540987	MAP7	Q14244	749 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	KRT33B	Q14525	404 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	CYP1B1	Q16678	543 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	SYTL3	Q4VX76	610 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	FASTKD1	Q53R41	847 aa	Known RBP	13.25	□□□□□ -0.29
POLE-215	ENST00000540987	LYPLAL1	Q5VWZ2	237 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	LRRC8B	Q6P9F7	803 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	CES3	Q6UWW8	571 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	KMT5C	Q86Y97	462 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	MPP5	Q8N3R9	675 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	ZNF843	Q8N446	348 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	D2HGDH	Q8N465	521 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	EXD3	Q8N9H8	876 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	GALNT6	Q8NCL4	622 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	LCN9	Q8WX39	176 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	TFG	Q92734	400 aa	Predicted RBP	13.25	□□□□□ -0.29
POLE-215	ENST00000540987	EXTL1	Q92935	676 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	PBK	Q96KB5	322 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	OSBPL9	Q96SU4	736 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	TRIM56	Q9BRZ2	755 aa	Known RBP	13.25	□□□□□ -0.29
POLE-215	ENST00000540987	IL22	Q9GZX6	179 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	SRMS	Q9H3Y6	488 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	HOMER3	Q9NSC5	361 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	CATSPERZ	Q9NTU4	200 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	NEU2	Q9Y3R4	380 aa		13.25	□□□□□ -0.29
POLE-215	ENST00000540987	PIEZO2	Q9H5I5	2752 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	UBA6	A0AVT1	1052 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	USP27X	A6NNY8	438 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	IQCF5	A8MTL0	148 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	PGRMC1	O00264	195 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	TERT	O14746	1132 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	SPAG6	O75602	509 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	KRT14	P02533	472 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	TPBGL	P0DKB5	382 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	F8A1	P23610	371 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	CCR7	P32248	378 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	COIL	P38432	576 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	NPY2R	P49146	381 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	CSE1L	P55060	971 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	ABHD18	Q0P651	414 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	GPS1	Q13098	491 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	PRKG2	Q13237	762 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	IL11RA	Q14626	422 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	GPR19	Q15760	415 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	TBR1	Q16650	682 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	ARMC6	Q6NXE6	501 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	RASGRP3	Q8IV61	690 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	VRK3	Q8IV63	474 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	ADGRF3	Q8IZF5	1079 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	KRT222	Q8N1A0	295 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	ESX1	Q8N693	406 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	CPT1B	Q92523	772 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	MAGOHB	Q96A72	148 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	MFSD3	Q96ES6	412 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	SLC45A3	Q96JT2	553 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	KIFC1	Q9BW19	673 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	TFB2M	Q9H5Q4	396 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	MRM3	Q9HC36	420 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	TRMT1	Q9NXH9	659 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	BFAR	Q9NZS9	450 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	LNPEP	Q9UIQ6	1025 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	SOX13	Q9UN79	622 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	CDYL	Q9Y232	598 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	BTRC	Q9Y297	605 aa		13.24	□□□□□ -0.29
POLE-215	ENST00000540987	MRPS18B	Q9Y676	258 aa	Known RBP	13.24	□□□□□ -0.29
POLE-215	ENST00000540987	COL6A6	A6NMZ7	2263 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	GSAP	A4D1B5	854 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ZNF185	O15231	689 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	CD3EAP	O15446	510 aa	Known RBP	13.23	□□□□□ -0.29
POLE-215	ENST00000540987	AVIL	O75366	819 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ZBTB11	O95625	1053 aa	Predicted RBP	13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ITGB2	P05107	769 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	PVR	P15151	417 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ST6GAL1	P15907	406 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	HSD11B2	P80365	405 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	CDK16	Q00536	496 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	AARS2	Q5JTZ9	985 aa	Known RBP	13.23	□□□□□ -0.29
POLE-215	ENST00000540987	PWWP2B	Q6NUJ5	590 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	ZNF449	Q6P9G9	518 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.23	□□□□□ -0.29
POLE-215	ENST00000540987	TRIM73	Q86UV7	250 aa		13.23	□□□□□ -0.29
POLE-215	ENST00000540987	CAND1	Q86VP6	1230 aa	Known RBP	13.23	□□□□□ -0.29
POLE-215	ENST00000540987	AMIGO1	Q86WK6	493 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms