RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PTRHD1Q6GMV3 140 aaKnown RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 ZNF449Q6P9G9 518 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 FAM92BQ6ZTR7 304 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 PRSS42Q7Z5A4 293 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 SDCCAG8Q86SQ7 713 aaPredicted RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 LRRC6Q86X45 466 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 FAM129CQ86XR2 697 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 SLC22A15Q8IZD6 547 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 OR52E1Q8NGJ3 308 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 OR5AR1Q8NGP9 310 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 KCNE4Q8WWG9 221 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 ART4Q93070 314 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 STAMBPL1Q96FJ0 436 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 CRELD1Q96HD1 420 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 TAAR9Q96RI9 348 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 TCF12Q99081 682 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 WDR83Q9BRX9 315 aaKnown RBP16.44■□□□□ 0.22
CD9-209ENST00000540891 B3GNT4Q9C0J1 378 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 MVB12BQ9H7P6 319 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 PLAC1Q9HBJ0 212 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 SEMA5BQ9P283 1151 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 GNPTGQ9UJJ9 305 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 SSUH2Q9Y2M2 353 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 B3GALT1Q9Y5Z6 326 aa16.44■□□□□ 0.22
CD9-209ENST00000540891 UBA6A0AVT1 1052 aaPredicted RBP16.43■□□□□ 0.22
CD9-209ENST00000540891 OR6C74A6NCV1 312 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 F8W8V4 182 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 SEC31AO94979 1220 aaKnown RBP16.43■□□□□ 0.22
CD9-209ENST00000540891 TPBGLP0DKB5 382 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 ABCG1P45844 678 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 ITGA8P53708 1063 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 ADARP55265 1226 aaKnown RBP16.43■□□□□ 0.22
CD9-209ENST00000540891 MC2RQ01718 297 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 C2orf54Q08AI8 447 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 HSPA14Q0VDF9 509 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 PRKG2Q13237 762 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 CLN3Q13286 438 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 KRT33BQ14525 404 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 COL28A1Q2UY09 1125 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 RNF187Q5TA31 235 aaPredicted RBP16.43■□□□□ 0.22
CD9-209ENST00000540891 ANKS6Q68DC2 871 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 KLHL35Q6PF15 583 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 LRRC69Q6ZNQ3 347 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 OOSP2Q86WS3 158 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 ZFAND4Q86XD8 727 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 IGDCC3Q8IVU1 814 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 DENND6AQ8IWF6 608 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 UNC5BQ8IZJ1 945 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 OR4E2Q8NGC2 313 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 KLHL6Q8WZ60 621 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 ZDHHC12Q96GR4 267 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 HGH1Q9BTY7 390 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 DDA1Q9BW61 102 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 TSSK1BQ9BXA7 367 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 TRIM31Q9BZY9 425 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 TFB2MQ9H5Q4 396 aaKnown RBP16.43■□□□□ 0.22
CD9-209ENST00000540891 APMAPQ9HDC9 416 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 HRASLS2Q9NWW9 162 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 SLC39A1Q9NY26 324 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 ASF1AQ9Y294 204 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 CRYL1Q9Y2S2 319 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 FAM169AQ9Y6X4 670 aa16.43■□□□□ 0.22
CD9-209ENST00000540891 IGHV5-51A0A0C4DH38 117 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 BTN3A3O00478 584 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 KLK10O43240 276 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 NIPSNAP2O75323 286 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 SLCO2B1O94956 709 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 S1PR4O95977 384 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 PGAM1P18669 254 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 FMO4P31512 558 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 RPL21P46778 160 aaKnown RBP16.42■□□□□ 0.22
CD9-209ENST00000540891 SEPHS1P49903 392 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 SH3BP2P78314 561 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 CRYMQ14894 314 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 TGIF1Q15583 401 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 LONRF1Q17RB8 773 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 CACHD1Q5VU97 1274 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 ZNF470Q6ECI4 717 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 TBC1D21Q8IYX1 336 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.42■□□□□ 0.22
CD9-209ENST00000540891 SNF8Q96H20 258 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 C16orf45Q96MC5 204 aaPredicted RBP16.42■□□□□ 0.22
CD9-209ENST00000540891 PPM1MQ96MI6 270 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 PANX3Q96QZ0 392 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 MAP3K3Q99759 626 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 EBNA1BP2Q99848 306 aaKnown RBP16.42■□□□□ 0.22
CD9-209ENST00000540891 CTRCQ99895 268 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 FBXO8Q9NRD0 319 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 C20orf96Q9NUD7 363 aaPredicted RBP16.42■□□□□ 0.22
CD9-209ENST00000540891 ICKQ9UPZ9 632 aa16.42■□□□□ 0.22
CD9-209ENST00000540891 ADAMTS20P59510 1910 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 EFCAB8A8MWE9 144 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 BTN3A1O00481 513 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 RAD51CO43502 376 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 RASSF9O75901 435 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 ESR1P03372 595 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 APOA4P06727 396 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 POLR2CP19387 275 aaPredicted RBP16.41■□□□□ 0.22
CD9-209ENST00000540891 SLC1A2P43004 574 aa16.41■□□□□ 0.22
CD9-209ENST00000540891 KPNA2P52292 529 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms