RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TFB2MQ9H5Q4 396 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 FANCEQ9HB96 536 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ZBTB20Q9HC78 741 aaPredicted RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 SOHLH2Q9NX45 425 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 UBP1Q9NZI7 540 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 HACD3Q9P035 362 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 FAM153AQ9UHL3 310 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 LCMT1Q9UIC8 334 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 G3BP2Q9UN86 482 aaKnown RBP7.08□□□□□ -1.28
YBX3-209ENST00000540747 HEY1Q9Y5J3 304 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 PKDREJQ9NTG1 2253 aa7.08□□□□□ -1.28
YBX3-209ENST00000540747 ANKRD12Q6UB98 2062 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 DNHD1Q96M86 4753 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 IGLV3-16A0A075B6K0 115 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 LRRD1A4D1F6 860 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 MASP2O00187 686 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 APOL1O14791 398 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PPP1R12AO14974 1030 aaPredicted RBP7.07□□□□□ -1.28
YBX3-209ENST00000540747 ZNF749O43361 778 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 BUD23O43709 281 aaKnown RBP7.07□□□□□ -1.28
YBX3-209ENST00000540747 CTSBP07858 339 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 SLC35G4P0C7Q5 338 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 CBSLP0DN79 551 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PYGMP11217 842 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PVRP15151 417 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 NFKB1P19838 968 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 ITGAXP20702 1163 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 CYP2A7P20853 494 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 CDH3P22223 829 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PBLDP30039 288 aaPredicted RBP7.07□□□□□ -1.28
YBX3-209ENST00000540747 CBSP35520 551 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PREPP48147 710 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 LMAN1P49257 510 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PRLHRP49683 370 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 XIAPP98170 497 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 SSPNQ14714 243 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PTPRCAPQ14761 206 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 ZRSR2Q15696 482 aaKnown RBP7.07□□□□□ -1.28
YBX3-209ENST00000540747 SLC1A5Q15758 541 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 ZIC1Q15915 447 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PPP2R5EQ16537 467 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 ANO6Q4KMQ2 910 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 FILIP1LQ4L180 1135 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 LRRC38Q5VT99 294 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 RHBDD2Q6NTF9 364 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 ARMC6Q6NXE6 501 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 KCNMB4Q86W47 210 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 SRRM1Q8IYB3 904 aaKnown RBP7.07□□□□□ -1.28
YBX3-209ENST00000540747 ADGRF3Q8IZF5 1079 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 OR4E2Q8NGC2 313 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 OR2Y1Q8NGV0 311 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 HM13Q8TCT9 377 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 CLIP3Q96DZ5 547 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 FER1L6-AS2Q96M78 137 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 TTC25Q96NG3 672 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 FCRL5Q96RD9 977 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 TRIM5Q9C035 493 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 FAM60AQ9NP50 221 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 SLC22A11Q9NSA0 550 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 P4HTMQ9NXG6 502 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 CTTNBP2NLQ9P2B4 639 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 CAPN11Q9UMQ6 739 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 PADI2Q9Y2J8 665 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 CSAG2Q9Y5P2 127 aa7.07□□□□□ -1.28
YBX3-209ENST00000540747 COPG1Q9Y678 874 aaKnown RBP7.07□□□□□ -1.28
YBX3-209ENST00000540747 MDC1Q14676 2089 aaKnown RBP7.07□□□□□ -1.28
YBX3-209ENST00000540747 DOCK10Q96BY6 2186 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ZGRF1Q86YA3 2104 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 C17orf113A0A1B0GUU1 675 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 C9J4A7 227 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 E7EQ34 232 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 HNRNPRO43390 633 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 RRP9O43818 475 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 IPO13O94829 963 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 PRAMEF1O95521 474 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ONECUT2O95948 504 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 IGHEP01854 428 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 GYPCP04921 128 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ALPPP05187 535 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 HBQ1P09105 142 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 H2AFZP0C0S5 128 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 TMEM253P0C7T8 217 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 PECAM1P16284 738 aaPredicted RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 ZFXP17010 805 aaPredicted RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 MSH3P20585 1137 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 OTX2P32243 289 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ADRA1AP35348 466 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 CDKN2BP42772 138 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 TSFMP43897 325 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 CD151P48509 253 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 RIPPLY3P57055 190 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 FOXL2P58012 376 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 BOP1Q14137 746 aaKnown RBP7.06□□□□□ -1.28
YBX3-209ENST00000540747 LLGL1Q15334 1064 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 LYPLAL1Q5VWZ2 237 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 CCDC70Q6NSX1 233 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 SPESP1Q6UW49 350 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 MFSD7Q6UXD7 560 aa7.06□□□□□ -1.28
YBX3-209ENST00000540747 H2AFVQ71UI9 128 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms