RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 IGLV3-16A0A075B6K0 115 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 GSAPA4D1B5 854 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 TMEM150CB9EJG8 249 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 E7EQ34 232 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 H7C0C1 242 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 DDAH2O95865 285 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 GSTM1P09488 218 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 CYP2A7P20853 494 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 AGXTP21549 392 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 ATP5OP48047 213 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 COPS2P61201 443 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 GSTM4Q03013 218 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 RPA4Q13156 261 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 MSLNQ13421 630 aaPredicted RBP11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 PRPSAP1Q14558 356 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 NCF4Q15080 339 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 GPR33Q49SQ1 333 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 ZNF658BQ4V348 819 aaPredicted RBP11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 C11orf63Q6NUN7 778 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 SARM1Q6SZW1 724 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 DAAM2Q86T65 1068 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 RAB43Q86YS6 212 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 ZBTB2Q8N680 514 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 Q8NA96 180 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 IP6K3Q96PC2 410 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 TRAPPC9Q96Q05 1148 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 FERD3LQ96RJ6 166 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 C17orf62Q9BQA9 187 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 NUDT9Q9BW91 350 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 SLC7A5P2Q9GIP4 190 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 OR52A5Q9H2C5 316 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 VPS37BQ9H9H4 285 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 ARNT2Q9HBZ2 717 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 SLAMF7Q9NQ25 335 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 GPR83Q9NYM4 423 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 C5AR2Q9P296 337 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 FAM8A1Q9UBU6 413 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 EFR3BQ9Y2G0 817 aa11.65□□□□□ -0.54
CBX3P4-202ENST00000540428 SPTAN1Q13813 2472 aaKnown RBP11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 CCDC66A2RUB6 948 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 C2orf74A8MZ97 194 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 C9J4A7 227 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 H7C0S8 307 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 BTN3A3O00478 584 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 BTN3A1O00481 513 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ZNF185O15231 689 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 KLHL41O60662 606 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ZNF189O75820 626 aaPredicted RBP11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 LCA5LO95447 670 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 CD63P08962 238 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ST6GAL1P15907 406 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 MAGEA1P43355 309 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 LMAN1P49257 510 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ZNF140P52738 457 aaPredicted RBP11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ITGA1P56199 1179 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ANKRD20A2Q5SQ80 823 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ANKRD20A1Q5TYW2 823 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ANKRD20A3Q5VUR7 823 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ZNF385CQ66K41 422 aaPredicted RBP11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 SLC6A19Q695T7 634 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ZNF449Q6P9G9 518 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 AMIGO1Q86WK6 493 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 CDKL3Q8IVW4 592 aaPredicted RBP11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 RBMXL3Q8N7X1 1067 aaKnown RBP11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 OR52E1Q8NGJ3 308 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 OR13C4Q8NGS5 318 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 NAT14Q8WUY8 206 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 LRRC45Q96CN5 670 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 SGSM3Q96HU1 749 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 CHRNA10Q9GZZ6 450 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 GOLPH3Q9H4A6 298 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 ZDHHC3Q9NYG2 299 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 AP1M2Q9Y6Q5 423 aa11.64□□□□□ -0.55
CBX3P4-202ENST00000540428 TRBV5-4A0A0C4DH59 114 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 TCP11X1B4DZS4 312 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 AKR1B15C9JRZ8 316 aaPredicted RBP11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 ZNF749O43361 778 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 SEMA7AO75326 666 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 STK10O94804 968 aaKnown RBP11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 IGHEP01854 428 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 PTMSP20962 102 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 ACRV1P26436 265 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 PSMB4P28070 264 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 MARCKSL1P49006 195 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 OLIG2Q13516 323 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 BOP1Q14137 746 aaKnown RBP11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 SSPNQ14714 243 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 PTCHD3Q3KNS1 767 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 CCDC181Q5TID7 509 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 VWA5B1Q5TIE3 1220 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 DENND5AQ6IQ26 1287 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 CDHR3Q6ZTQ4 885 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 KLHDC8BQ8IXV7 354 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 GPR135Q8IZ08 494 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 ADGRF3Q8IZF5 1079 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 ACTL9Q8TC94 416 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 TFGQ92734 400 aaPredicted RBP11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 KRT35Q92764 455 aa11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.63□□□□□ -0.55
CBX3P4-202ENST00000540428 FER1L6-AS2Q96M78 137 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms