RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 HERVK_113Q902F9 699 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PIK3R3Q92569 461 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 C8orf48Q96LL4 319 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CIB1Q99828 191 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CHCHD6Q9BRQ6 235 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 TAPBPLQ9BX59 468 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 DTLQ9NZJ0 730 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 SCML2Q9UQR0 700 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 AREL1O15033 823 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 NME6O75414 186 aaPredicted RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 REM1O75628 298 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CYB5AP00167 134 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 GSTT2BP0CG30 244 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 KCNA5P22460 613 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 NDUFS1P28331 727 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 AQP1P29972 269 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 RPS14P62263 151 aaKnown RBP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ECT2LQ008S8 904 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CARD16Q5EG05 197 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 SLC30A6Q6NXT4 461 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 NUP54Q7Z3B4 507 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 GALNT7Q86SF2 657 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 CRYBG2Q8N1P7 616 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 SRMSQ9H3Y6 488 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 HCN3Q9P1Z3 774 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.39□□□□□ -1.39
LSAMP-207ENST00000539563 ZNF541Q9H0D2 1346 aa6.39□□□□□ -1.39
LSAMP-207ENST00000539563 PRORSD1PA6NEY8 169 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CA12O43570 354 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SHOX2O60902 331 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SERPINA3P01011 423 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 LMO2P25791 158 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 MASP1P48740 699 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PPP3R1P63098 170 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 HSF2Q03933 536 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ISLR2Q6UXK2 745 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CIR1Q86X95 450 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ZDHHC21Q8IVQ6 265 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CPNE9Q8IYJ1 553 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NAT8LQ8N9F0 302 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CMASQ8NFW8 434 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 TSEN15Q8WW01 171 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 MIPEPQ99797 713 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 KCNS3Q9BQ31 491 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 IKZF4Q9H2S9 585 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 POLR3BQ9NW08 1133 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SNX10Q9Y5X0 201 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 TCRBV7S2A1N4TA0A589 114 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PDPK1O15530 556 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 GADD45GO95257 159 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 INHAP05111 366 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NRG1Q02297 640 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 C5orf22Q49AR2 442 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 C6orf52Q5T4I8 152 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 AVL9Q8NBF6 648 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PCDH19Q8TAB3 1148 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NUS1Q96E22 293 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SUSD3Q96L08 255 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NSMCE3Q96MG7 304 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CAMK1GQ96NX5 476 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 TMEM209Q96SK2 561 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SPATA9Q9BWV2 254 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 DPEP2Q9H4A9 486 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FCF1Q9Y324 198 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FAM240BA0A1B0GVZ2 78 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 C2orf71A6NGG8 1288 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PIP5K1BO14986 540 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FFAR2O15552 330 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 OR4F21O95013 312 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 IL7RP16871 459 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 HERVK_113P63132 956 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 AKAP14Q86UN6 197 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FAM129CQ86XR2 697 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PYROXD2Q8N2H3 581 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SIDT2Q8NBJ9 832 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 TFAP2BQ92481 460 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 TLCD1Q96CP7 247 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 MGME1Q9BQP7 344 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ERVK-6Q9BXR3 956 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 USP29Q9HBJ7 922 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ABCB8Q9NUT2 735 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 OSER1Q9NX31 292 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 EIF2B4Q9UI10 523 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 DUXAA6NLW8 204 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 OR2AG2A6NM03 316 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PITPNM1O00562 1244 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 HOXC12P31275 282 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 MSX2P35548 267 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 NFKB2Q00653 900 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 SPIN4Q56A73 249 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ANKRD22Q5VYY1 191 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 ADGRG6Q86SQ4 1221 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FSTL5Q8N475 847 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 COX18Q8N8Q8 333 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 HCAR2Q8TDS4 363 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 LENG8Q96PV6 779 aaPredicted RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 FARSBQ9NSD9 589 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 DNAAF2Q9NVR5 837 aaKnown RBP6.38□□□□□ -1.39
LSAMP-207ENST00000539563 CXCR6O00574 342 aa6.38□□□□□ -1.39
LSAMP-207ENST00000539563 PDCD5O14737 125 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms