RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 KRCC1Q9NPI7 259 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 BABAM1Q9NWV8 329 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 IL1RAPL1Q9NZN1 696 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TTC7AQ9ULT0 858 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 R3HDM2Q9Y2K5 976 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 BSNQ9UPA5 3926 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HECTD4Q9Y4D8 3996 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 A0A1W2PP11 408 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SMIM30A4D0T7 59 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HEPACAM2A8MVW5 462 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 KDM4EB2RXH2 506 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TULP2O00295 520 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF197O14709 1029 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ACOT8O14734 319 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PRKNO60260 465 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RGS11O94810 467 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 LUC7L3O95232 432 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GCNT3O95395 438 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MYBL1P10243 752 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 OAS2P29728 719 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HLA-FP30511 346 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CAMPP49913 170 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF75DP51815 510 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 IL9RQ01113 521 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PNRC1Q12796 327 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PRKAA1Q13131 559 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TNIP1Q15025 636 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PPP2R5BQ15173 497 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SLC15A2Q16348 729 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZSWIM7Q19AV6 140 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SMTNL2Q2TAL5 461 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 HERC4Q5GLZ8 1057 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CFAP58Q5T655 872 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MFSD4BQ5TF39 518 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZCCHC12Q6PEW1 402 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TAOK1Q7L7X3 1001 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ADCK1Q86TW2 530 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 TBC1D26Q86UD7 250 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NFE4Q86UQ8 179 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZSCAN30Q86W11 494 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MARCH9Q86YJ5 346 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 GHDCQ8N2G8 530 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 IQCF1Q8N6M8 205 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF611Q8N823 705 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 B4GALNT2Q8NHY0 566 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 PPP4R1Q8TF05 950 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 NAP1L5Q96NT1 182 aaPredicted RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 SDCBP2Q9H190 292 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CLK4Q9HAZ1 481 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 LRRC4Q9HBW1 653 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MAGEE1Q9HCI5 957 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 OLAHQ9NV23 265 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MRPL15Q9P015 296 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RASAL2Q9UJF2 1139 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ERVK-11Q9UQG0 969 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 LAMP3Q9UQV4 416 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 MRPS7Q9Y2R9 242 aaKnown RBP1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CEPT1Q9Y6K0 416 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 CCDC180Q9P1Z9 1646 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ADAMTSL3P82987 1691 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 RB1CC1Q8TDY2 1594 aa1.02□□□□□ -2.25
HIF1A-204ENST00000539097 ADGRL1O94910 1474 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 WDR62O43379 1518 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 IGLV5-37A0A075B6J1 123 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 A0A0A6YYC8 382 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NPIPA5A0A0B4J1W7 369 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 A0A0B4J293 547 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FAM90A26D6RGX4 464 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NPIPA5E9PKD4 350 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FAM72CH0Y354 149 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 I3L1I5 382 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PLOD2O00469 737 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CLIC2O15247 247 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 OR10H2O60403 315 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 RHOBTB1O94844 696 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CH25HO95992 272 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 IGHV4-39P01824 125 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CSN3P07498 182 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SUPT20HL2P0C7V6 817 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SLC2A4P14672 509 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 EDNRAP25101 427 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 CD27P26842 260 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NKX2-1P43699 371 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MMP15P51511 669 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 RRP1P56182 461 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 UBASH3AP57075 661 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 MAT1AQ00266 395 aaKnown RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 SORDQ00796 357 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 IL10RBQ08334 325 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 ZNF273Q14593 569 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 RPS6KA1Q15418 735 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 UGP2Q16851 508 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 IGSF11Q5DX21 431 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FAM72AQ5TYM5 149 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 TXNRD3NBQ6F5E7 133 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 FAM72DQ6L9T8 149 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 NHLRC1Q6VVB1 395 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 PACS1Q6VY07 963 aa1.01□□□□□ -2.25
HIF1A-204ENST00000539097 C11orf57Q6ZUT1 292 aaPredicted RBP1.01□□□□□ -2.25
HIF1A-204ENST00000539097 DPPA4Q7L190 304 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms