RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 MINDY1Q8N5J2 469 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 GIMAP7Q8NHV1 300 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 BCAS4Q8TDM0 211 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 GPBAR1Q8TDU6 330 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 LMX1AQ8TE12 382 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 ZNF473Q8WTR7 871 aaKnown RBP16.88■□□□□ 0.29
CLN6-202ENST00000538696 PANX3Q96QZ0 392 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 SLC30A3Q99726 388 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 FGFR1OP2Q9NVK5 253 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 UCKL1Q9NWZ5 548 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 TAS2R13Q9NYV9 303 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 XPR1Q9UBH6 696 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 SPASTQ9UBP0 616 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 DNAJC16Q9Y2G8 782 aa16.88■□□□□ 0.29
CLN6-202ENST00000538696 MGAT4DA6NG13 374 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 F8W8V4 182 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 G3V2L1 256 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 FAM107AO95990 144 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 NEFHP12036 1026 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 CTSEP14091 401 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 ZNF37AP17032 561 aaPredicted RBP16.87■□□□□ 0.29
CLN6-202ENST00000538696 KCNA4P22459 653 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 CCR7P32248 378 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 CCT8P50990 548 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 DMPKQ09013 629 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 BNIP3Q12983 259 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 NFE2L1Q14494 772 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 CHI3L2Q15782 390 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 TECRLQ5HYJ1 363 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 CES4AQ5XG92 561 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 PAQR3Q6TCH7 311 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 NAPRTQ6XQN6 538 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 KANSL1Q7Z3B3 1105 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 AMZ2Q86W34 360 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 TMEM151AQ8N4L1 468 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 LILRA3Q8N6C8 439 aaPredicted RBP16.87■□□□□ 0.29
CLN6-202ENST00000538696 SIDT2Q8NBJ9 832 aaKnown RBP16.87■□□□□ 0.29
CLN6-202ENST00000538696 OR2L2Q8NH16 312 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 HM13Q8TCT9 377 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 CD200R1Q8TD46 325 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 ELMO1Q92556 727 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 KCNJ9Q92806 393 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 UBXN10Q96LJ8 280 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 TSSK1BQ9BXA7 367 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 MANSC1Q9H8J5 431 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 COG4Q9H9E3 785 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 SLCO1B3Q9NPD5 702 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 KLC4Q9NSK0 619 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 CPSF2Q9P2I0 782 aaKnown RBP16.87■□□□□ 0.29
CLN6-202ENST00000538696 COPG2Q9UBF2 871 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 FAM8A1Q9UBU6 413 aa16.87■□□□□ 0.29
CLN6-202ENST00000538696 TRMT6Q9UJA5 497 aaKnown RBP16.87■□□□□ 0.29
CLN6-202ENST00000538696 C17orf113A0A1B0GUU1 675 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 YKT6O15498 198 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 AQP9O43315 295 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 DFNA5O60443 496 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 APOA4P06727 396 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 GSTM1P09488 218 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 FGF3P11487 239 aaPredicted RBP16.86■□□□□ 0.29
CLN6-202ENST00000538696 CPA3P15088 417 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 CHRM3P20309 590 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 CD9P21926 228 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 DGKAP23743 735 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 CLCN7P51798 805 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 CLCNKAP51800 687 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 KPNA2P52292 529 aaKnown RBP16.86■□□□□ 0.29
CLN6-202ENST00000538696 GSTM4Q03013 218 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 ILF3Q12906 894 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLN6-202ENST00000538696 AGAP9Q5VTM2 703 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 ZYG11AQ6WRX3 759 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 PRR23CQ6ZRP0 262 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 C10orf107Q8IVU9 208 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 TRIM42Q8IWZ5 723 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 FSTL5Q8N475 847 aaPredicted RBP16.86■□□□□ 0.29
CLN6-202ENST00000538696 GSDMCQ9BYG8 508 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 NSRP1Q9H0G5 558 aaKnown RBP16.86■□□□□ 0.29
CLN6-202ENST00000538696 RXFP3Q9NSD7 469 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 MID2Q9UJV3 735 aa16.86■□□□□ 0.29
CLN6-202ENST00000538696 ARID1BQ8NFD5 2236 aaPredicted RBP16.86■□□□□ 0.29
CLN6-202ENST00000538696 KLHL33A6NCF5 533 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 TARM1B6A8C7 271 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 E5RI56 91 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 NDUFAB1O14561 156 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 KCNJ13O60928 360 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 CD1DP15813 335 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 VCLP18206 1134 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 AOAHP28039 575 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 SLC26A3P40879 764 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 ACTR1BP42025 376 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 PREPP48147 710 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 ATXN3P54252 364 aaPredicted RBP16.85■□□□□ 0.29
CLN6-202ENST00000538696 ACTR1AP61163 376 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 BOP1Q14137 746 aaKnown RBP16.85■□□□□ 0.29
CLN6-202ENST00000538696 ELOCQ15369 112 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 FAM83EQ2M2I3 478 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 CGB2Q6NT52 195 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 SLC30A9Q6PML9 568 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 ZCCHC23Q6ZST2 131 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 CPLX4Q7Z7G2 160 aa16.85■□□□□ 0.29
CLN6-202ENST00000538696 RDH11Q8TC12 318 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms