RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ADGRG2Q8IZP9 1017 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 PAF1Q8N7H5 531 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 PDPRQ8NCN5 879 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 TANKQ92844 425 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 THAP11Q96EK4 314 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 FEM1AQ9BSK4 669 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 ING2Q9H160 280 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 EXD2Q9NVH0 621 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 LRFN2Q9ULH4 789 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 ANGPTL3Q9Y5C1 460 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 CASP8AP2Q9UKL3 1982 aa11.74□□□□□ -0.53
CPNE8-203ENST00000538596 C1orf232A0A0U1RR37 186 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZNF182P17025 639 aaPredicted RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 CSKP41240 450 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZXDBP98169 803 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 MAPKAPK3Q16644 382 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 IMPG1Q17R60 797 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 SULT1C3Q6IMI6 304 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 CHST9Q7L1S5 443 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 SLC22A15Q8IZD6 547 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 BPIFB6Q8NFQ5 453 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 PIH1D2Q8WWB5 315 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 IL26Q9NPH9 171 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 COMMD8Q9NX08 183 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 TNPO3Q9Y5L0 923 aaKnown RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 THSD7BQ9C0I4 1608 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 KRT87PA6NCN2 255 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 LOC730098B7Z3J9 87 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 G3V2T6 193 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 H7C4K7 107 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ARVCFO00192 962 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 AREL1O15033 823 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 SEC22BO75396 215 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 PRKD3O94806 890 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 GSNP06396 782 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 NAA20P61599 178 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 CYP4F3Q08477 520 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 GCNT7Q6ZNI0 430 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 R3HCC1LQ7Z5L2 792 aaKnown RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 TMEM179BQ7Z7N9 219 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZC3H7AQ8IWR0 971 aaKnown RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 RGL4Q8IZJ4 473 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 APCDD1Q8J025 514 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 STK40Q8N2I9 435 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZNF548Q8NEK5 533 aaPredicted RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 PDZD8Q8NEN9 1154 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 SLC22A17Q8WUG5 538 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 PLD4Q96BZ4 506 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 MYO19Q96H55 970 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 PDLIM5Q96HC4 596 aaKnown RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 CDK5RAP1Q96SZ6 601 aaKnown RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 VN1R3Q9BXE9 311 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 AMBRA1Q9C0C7 1298 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 CWH43Q9H720 699 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 C8orf4Q9NR00 106 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZNF490Q9ULM2 529 aaPredicted RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 PCDHGA8Q9Y5G5 932 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 U3KQV3 271 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 A0A1W2PQ45 241 aaPredicted RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 A0A1W2PQY0 241 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 H0YAE9 185 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 TULP3O75386 442 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 PRSS23O95084 383 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 CST1P01037 141 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 C1QCP02747 245 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 NR4A1P22736 598 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 HTRA3P83110 453 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 NFATC2Q13469 925 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 MEP1AQ16819 746 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ARMC12Q5T9G4 340 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 FAM117BQ6P1L5 589 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ANKRD46Q86W74 232 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZDHHC13Q8IUH4 622 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 EGFL6Q8IUX8 553 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 FNDC8Q8TC99 324 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 DOK1Q99704 481 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 KLF16Q9BXK1 252 aaPredicted RBP11.73□□□□□ -0.53
CPNE8-203ENST00000538596 DPY30Q9C005 99 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZFYVE1Q9HBF4 777 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 TRPM5Q9NZQ8 1165 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 LMCD1Q9NZU5 365 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 CDH7Q9ULB5 785 aa11.73□□□□□ -0.53
CPNE8-203ENST00000538596 ZNF701M0R085 212 aaPredicted RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PGLSO95336 258 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PGRP06401 933 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 ZNF7P17097 686 aaPredicted RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 TM4SF4P48230 202 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 PHC1P78364 1004 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 SMAD3P84022 425 aaKnown RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 MTA1Q13330 715 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 CPSF6Q16630 551 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 XAF1Q6GPH4 301 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 SPESP1Q6UW49 350 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 RBM23Q86U06 439 aaKnown RBP11.72□□□□□ -0.53
CPNE8-203ENST00000538596 TSPAN33Q86UF1 283 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 OR8J3Q8NGG0 315 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 TBC1D15Q8TC07 691 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 SNX19Q92543 992 aa11.72□□□□□ -0.53
CPNE8-203ENST00000538596 RHBDF1Q96CC6 855 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms