RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SHANK1Q9Y566 2161 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 GSAPA4D1B5 854 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 GRID2IPA4D2P6 1211 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 CLEC18AA5D8T8 446 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 C2orf74A8MZ97 194 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 F8W8V4 182 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 PSMD3O43242 534 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 FTH1P02794 183 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 NTRK1P04629 796 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 PTMAP06454 111 aaKnown RBP8.4□□□□□ -1.06
DDB1-212ENST00000538470 POLBP06746 335 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 POLR2CP19387 275 aaPredicted RBP8.4□□□□□ -1.06
DDB1-212ENST00000538470 RORAP35398 523 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 PGDP52209 483 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 NAP1L1P55209 391 aaKnown RBP8.4□□□□□ -1.06
DDB1-212ENST00000538470 CACNG1Q06432 222 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 GPS2Q13227 327 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 IL10RAQ13651 578 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 ITIH4Q14624 930 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 ZRANB3Q5FWF4 1079 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 COLEC12Q5KU26 742 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 KCTD11Q693B1 232 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 CLEC18BQ6UXF7 455 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 CERS6Q6ZMG9 384 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 TMEM135Q86UB9 458 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 SERPINA9Q86WD7 417 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 ATCAYQ86WG3 371 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 CFAP206Q8IYR0 622 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 DSELQ8IZU8 1212 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 SYCE1Q8N0S2 351 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 LILRA3Q8N6C8 439 aaPredicted RBP8.4□□□□□ -1.06
DDB1-212ENST00000538470 UBL4BQ8N7F7 174 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 SPC24Q8NBT2 197 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 CLEC18CQ8NCF0 446 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 ALG3Q92685 438 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 MR1Q95460 341 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 RNF31Q96EP0 1072 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 DPH2Q9BQC3 489 aaPredicted RBP8.4□□□□□ -1.06
DDB1-212ENST00000538470 TLR10Q9BXR5 811 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 TLK1Q9UKI8 766 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 G3BP2Q9UN86 482 aaKnown RBP8.4□□□□□ -1.06
DDB1-212ENST00000538470 SNX7Q9UNH6 387 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 FARSAQ9Y285 508 aaKnown RBP8.4□□□□□ -1.06
DDB1-212ENST00000538470 PCDHGB7Q9Y5F8 929 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 RELNP78509 3460 aa8.4□□□□□ -1.06
DDB1-212ENST00000538470 ANKRD12Q6UB98 2062 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 SLC9B1P1A6NJY1 282 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 ERI2A8K979 691 aaKnown RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 TMEM150CB9EJG8 249 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 BTN3A1O00481 513 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 LIN7AO14910 233 aaPredicted RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 KDM1AO60341 852 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 AP2A1O95782 977 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 HBQ1P09105 142 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 NR1D1P20393 614 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 CYP2A7P20853 494 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PSMA3P25788 255 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PRDX3P30048 256 aaKnown RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 SHMT2P34897 504 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 NSG1P42857 185 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PREPP48147 710 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 ARCN1P48444 511 aaKnown RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 ITGA1P56199 1179 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 RPS18P62269 152 aaKnown RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 TMPRSS15P98073 1019 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PLOD1Q02809 727 aaPredicted RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 ABRQ12979 859 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 KLF1Q13351 362 aaPredicted RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 BOP1Q14137 746 aaKnown RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 UBAP2LQ14157 1087 aaKnown RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 ZNF789Q5FWF6 425 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PLEKHS1Q5SXH7 462 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PAPD7Q5XG87 772 aaKnown RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 FAM199XQ6PEV8 388 aaPredicted RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 FAM198BQ6UWH4 519 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PACS1Q6VY07 963 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PEX26Q7Z412 305 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 LINC00523Q86TU6 105 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 AMIGO1Q86WK6 493 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 OR4E2Q8NGC2 313 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 OR52E1Q8NGJ3 308 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 ADAMTS17Q8TE56 1095 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 TFGQ92734 400 aaPredicted RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.39□□□□□ -1.07
DDB1-212ENST00000538470 ALS2CR12Q96Q35 445 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 FERD3LQ96RJ6 166 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 RUFY1Q96T51 708 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 FAM118BQ9BPY3 351 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 C17orf62Q9BQA9 187 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 HGH1Q9BTY7 390 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 DHRS4Q9BTZ2 278 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 NLNQ9BYT8 704 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 LACRTQ9GZZ8 138 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 CHST8Q9H2A9 424 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 ACTR5Q9H9F9 607 aaPredicted RBP8.39□□□□□ -1.07
DDB1-212ENST00000538470 MLXIPLQ9NP71 852 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 ACSS2Q9NR19 701 aa8.39□□□□□ -1.07
DDB1-212ENST00000538470 PCMTD2Q9NV79 361 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms