RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 LILRB1Q8NHL6 650 aaPredicted RBP11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 SLC7A6Q92536 515 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 PMEPA1Q969W9 287 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 TMCO6Q96DC7 493 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 HPDLQ96IR7 371 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 PIWIL1Q96J94 861 aaKnown RBP11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 C3orf30Q96M34 536 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 APOL4Q9BPW4 351 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 CDADC1Q9BWV3 514 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 RANGRFQ9HD47 186 aaPredicted RBP11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 C3orf18Q9UK00 162 aa11.18□□□□□ -0.62
SEMA4D-221ENST00000537934 SMIM28A0A1B0GU29 152 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 TYW5A2RUC4 315 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 H3BMM5 538 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 H3BQ06 376 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 ARHGEF9O43307 516 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 MRPS14O60783 128 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 UGT2B17O75795 530 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 AFF1P51825 1210 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 UGT2B15P54855 530 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 OLIG2Q13516 323 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 ZBTB6Q15916 424 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 FBXO47Q5MNV8 452 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 DENND5AQ6IQ26 1287 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 BLOC1S3Q6QNY0 202 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 SVOPLQ8N434 492 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 DTX3Q8N9I9 347 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 TSPEARQ8WU66 669 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 LPPQ93052 612 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 SLC38A4Q969I6 547 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 DEFB118Q96PH6 123 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CSPG4P5Q96PW8 444 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 UGT2B28Q9BY64 529 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 TIGARQ9NQ88 270 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 EXD2Q9NVH0 621 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 SCN3BQ9NY72 215 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CCDC59Q9P031 241 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 MAGEL2Q9UJ55 1249 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 TBC1D24Q9ULP9 559 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 PADI3Q9ULW8 664 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 PCDHGB2Q9Y5G2 931 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 DSCR3O14972 297 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 IPO13O94829 963 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 EPN2O95208 641 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 MT-ND2P03891 347 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 STMN1P16949 149 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CBLP22681 906 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 SDC4P31431 198 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 IL12RB1P42701 662 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 GLUD2P49448 558 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CXCR4P61073 352 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CHRNB3Q05901 458 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 PTPN11Q06124 597 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 SOX4Q06945 474 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 ZNF460Q14592 562 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 FAM214AQ32MH5 1076 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 FUT11Q495W5 492 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 SPANXN2Q5MJ10 180 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CLEC6AQ6EIG7 209 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 XKRXQ6PP77 449 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 B3GNT8Q7Z7M8 397 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CEP97Q8IW35 865 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 ZNF567Q8N184 647 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 DNAAF3Q8N9W5 541 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 LHFPL5Q8TAF8 219 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 LRRC20Q8TCA0 184 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 HEXDCQ8WVB3 486 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CCDC120Q96HB5 630 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 TMEM80Q96HE8 168 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 NEDD4LQ96PU5 975 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 FYTTD1Q96QD9 318 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 SDHCQ99643 169 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 KIFC1Q9BW19 673 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 ZNF556Q9HAH1 456 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 LIN7BQ9HAP6 207 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 CASS4Q9NQ75 786 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 FAM105AQ9NUU6 356 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 EIF3KQ9UBQ5 218 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 DNAJB9Q9UBS3 223 aa11.17□□□□□ -0.62
SEMA4D-221ENST00000537934 A0A087X1B8 175 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 A0A1W2PP18 115 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 OR2A25A4D2G3 310 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 EEF2KO00418 725 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 SLC9A3R1O14745 358 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 AIREO43918 545 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 PGLSO95336 258 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 FADS2O95864 444 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 AHSGP02765 367 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 CFL1P23528 166 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 MAGEA11P43364 429 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 B2MP61769 119 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 RBP5P82980 135 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 IL5RAQ01344 420 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 FAPQ12884 760 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 DPY19L3Q6ZPD9 716 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 RPS27LQ71UM5 84 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 SH3KBP1Q96B97 665 aa11.16□□□□□ -0.62
SEMA4D-221ENST00000537934 OR2A14Q96R47 310 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms