RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ASMTP46597 345 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 DEFA6Q01524 100 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 PFKPQ01813 784 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 PPP3CAQ08209 521 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 FAM174BQ3ZCQ3 159 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 PIGGQ5H8A4 983 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 ADGRD1Q6QNK2 874 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 MPZL3Q6UWV2 235 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 STK40Q8N2I9 435 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 TUBA1CQ9BQE3 449 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 LMAN2LQ9H0V9 348 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 RC3H2Q9HBD1 1191 aaKnown RBP5.59□□□□□ -1.52
CSMD1-215ENST00000537824 USP29Q9HBJ7 922 aa5.59□□□□□ -1.52
CSMD1-215ENST00000537824 METP08581 1390 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 KNDC1Q76NI1 1749 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SLC35F4A4IF30 521 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PIRTP0C851 137 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 RAB3BP20337 219 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CD6P30203 668 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PRMT2P55345 433 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 MC1RQ01726 317 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 LRP8Q14114 963 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CMPK2Q5EBM0 449 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 GPRC6AQ5T6X5 926 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 FAM183BPQ6ZVS7 135 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CADM2Q8N3J6 435 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 HJURPQ8NCD3 748 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 AUTS2Q8WXX7 1259 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CDK5RAP1Q96SZ6 601 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PNPLA6Q8IY17 1366 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 MOXD2PA6NHM9 499 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CDK4P11802 303 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 EPCAMP16422 314 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 RPL9P32969 192 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CSTF2P33240 577 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 TRIM28Q13263 835 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 LIX1Q8N485 282 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 HNRNPABQ99729 332 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 ZYG11BQ9C0D3 744 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 HCN3Q9P1Z3 774 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 FAM237AA0A1B0GTK4 181 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 C13orf42A0A1B0GVH6 325 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 KLRC4O43908 158 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SLC6A3Q01959 620 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF697Q5TEC3 545 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 DOK6Q6PKX4 331 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 METTL4Q8N3J2 472 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 NKAPQ8N5F7 415 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SAMD12Q8N8I0 201 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PMM1Q92871 262 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SNAPC3Q92966 411 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 TMBIM1Q969X1 311 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 POLR2J3Q9H1A7 115 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 KCNN3Q9UGI6 736 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PARP4Q9UKK3 1724 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 NUDT14O95848 222 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 RGS6P49758 472 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 XKP51811 444 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 FMO1Q01740 532 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 LAPTM5Q13571 262 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CRY2Q49AN0 593 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 XKR6Q5GH73 641 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 ANKRD22Q5VYY1 191 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 ESRP1Q6NXG1 681 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 EFCAB12Q6NXP0 572 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 AGBL3Q8NEM8 1001 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CPB2Q96IY4 423 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 C1orf109Q9NX04 203 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 DNAJC27Q9NZQ0 273 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 TSPAN16Q9UKR8 245 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 DYRK3O43781 588 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 FGFR1P11362 822 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 GRIA2P42262 883 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SLC13A2Q13183 592 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 MEP1AQ16819 746 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PAOXQ6QHF9 649 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 NETO2Q8NC67 525 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 OR7G2Q8NG99 324 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 C1orf216Q8TAB5 229 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 COL26A1Q96A83 441 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PHB2Q99623 299 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 TDRD3Q9H7E2 651 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SETD4Q9NVD3 440 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SLC22A2O15244 555 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 ACSL4O60488 711 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 DDX6P26196 483 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 TBX4P57082 545 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 IRF8Q02556 426 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 AIMP2Q13155 320 aaKnown RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 STK11Q15831 433 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 CPSF6Q16630 551 aaKnown RBP eCLIP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SLC9B1Q4ZJI4 515 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 GMCL1P1Q8NEA9 526 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 OR2L8Q8NGY9 312 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF512BQ96KM6 892 aaPredicted RBP5.58□□□□□ -1.52
CSMD1-215ENST00000537824 MMP27Q9H306 513 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 WASH6PQ9NQA3 447 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 PLEKHA6Q9Y2H5 1048 aa5.58□□□□□ -1.52
CSMD1-215ENST00000537824 SETD1AO15047 1707 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms