RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 FAM174AQ8TBP5 190 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 ASB11Q8WXH4 323 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 NRTNQ99748 197 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 MRPL57Q9BQC6 102 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 LRRC61Q9BV99 259 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 ZDHHC5Q9C0B5 715 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 INTS9Q9NV88 658 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 PSD3Q9NYI0 1048 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 SCHIP1Q9P0W5 487 aaPredicted RBP15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 APOBEC3BQ9UH17 382 aaKnown RBP15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 RNF112Q9ULX5 631 aa15.3■□□□□ 0.04
SFSWAP-206ENST00000537582 ZNF318Q5VUA4 2279 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 PRAMEF33A0A0G2JMD5 474 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 A0A1B0GTW7 788 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 ARHGEF33A8MVX0 844 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 DLX3O60479 287 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 KERAO60938 352 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 SDC3O75056 442 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 MATN4O95460 622 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 CSF2P04141 144 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 GSTM1P09488 218 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 CPA3P15088 417 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 ALDH3A1P30838 453 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 ACTR1BP42025 376 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 C21orf59P57076 290 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 ACTR1AP61163 376 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 GSTM4Q03013 218 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 CLCA4Q14CN2 919 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 CCDC6Q16204 474 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 C18orf21Q32NC0 220 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 CCDC153Q494R4 210 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 PRRT3Q5FWE3 981 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 UBE2R2Q712K3 238 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 ZNF771Q7L3S4 317 aaPredicted RBP15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 PDZD3Q86UT5 571 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 DCP2Q8IU60 420 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 C10orf107Q8IVU9 208 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 PHC3Q8NDX5 983 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 CNOT10Q9H9A5 744 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 TRNAU1APQ9NX07 287 aaKnown RBP15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 COPG2Q9UBF2 871 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 PDE10AQ9Y233 779 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 MYO15AQ9UKN7 3530 aa15.29■□□□□ 0.04
SFSWAP-206ENST00000537582 LRRC14BA6NHZ5 514 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 OR52A4PA6NMU1 304 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 PDZK1P1A8MUH7 402 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 SUPT3HB4E1H0 165 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 EIF3FO00303 357 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 SUPT3HO75486 399 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 GUCA1CO95843 209 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 BPGMP07738 259 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 RBP1P09455 135 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 NME1P15531 152 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 VCLP18206 1134 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 KPNA2P52292 529 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 ZYG11AQ6WRX3 759 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 ZCCHC23Q6ZST2 131 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 NEK10Q6ZWH5 1172 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 GPSM1Q86YR5 675 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 SYT12Q8IV01 421 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 ARFGAP2Q8N6H7 521 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 LMNTD1Q8N9Z9 388 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 RHEBL1Q8TAI7 183 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 STAG3L4Q8TBR4 150 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 GPBAR1Q8TDU6 330 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 INSM2Q96T92 566 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 LRFN3Q9BTN0 628 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 DPEP2Q9H4A9 486 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 SMOC1Q9H4F8 434 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 TRBV23OR9-2A0A075B6M9 112 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 A8MT66 165 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 GFYI3L273 518 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 PSIP1O75475 530 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 SLC35G4P0C7Q5 338 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 MYL2P10916 166 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 GNSP15586 552 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 CTSKP43235 329 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 RPA4Q13156 261 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 LRP8Q14114 963 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 TEAD4Q15561 434 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 TGFBIQ15582 683 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 PEAR1Q5VY43 1037 aaPredicted RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 CAPRIN2Q6IMN6 1127 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 RPS27LQ71UM5 84 aaKnown RBP15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 ADAMTSL2Q86TH1 951 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 OR5AR1Q8NGP9 310 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 PATE1Q8WXA2 126 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 PHF21BQ96EK2 531 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 ZMYND15Q9H091 742 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 UCKL1Q9NWZ5 548 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 ASB1Q9Y576 335 aa15.28■□□□□ 0.04
SFSWAP-206ENST00000537582 KNL1Q8NG31 2342 aa15.27■□□□□ 0.04
SFSWAP-206ENST00000537582 FRYLO94915 3013 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 A6NCN8 305 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 C1orf105O95561 183 aa15.27■□□□□ 0.03
SFSWAP-206ENST00000537582 CFIP05156 583 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms