RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 HSPA7P48741 367 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 GLUD2P49448 558 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 RAB15P59190 212 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 EIF2S3LQ2VIR3 472 aaKnown RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 MSANTD2Q6P1R3 559 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 MAB21L3Q8N8X9 362 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 RAB2BQ8WUD1 216 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 LRRN4Q8WUT4 740 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 NAT14Q8WUY8 206 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 SGCDQ92629 289 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 COQ8BQ96D53 544 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 DHRS1Q96LJ7 313 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 AGAP2Q99490 1192 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 KXD1Q9BQD3 176 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 TBC1D17Q9HA65 648 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 PCDHGA11Q9Y5H2 935 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 COL5A3P25940 1745 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 MAGEB17A8MXT2 336 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 PPEF2O14830 753 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 AP2A1O95782 977 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 ZBTB48P10074 688 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 BRCC3P46736 316 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 VLDLRP98155 873 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 MAP2K5Q13163 448 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 DPY19L1Q2PZI1 675 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 SLC9A4Q6AI14 798 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 USP50Q70EL3 339 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 ANKS1BQ7Z6G8 1248 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 TMEM17Q86X19 198 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 CFAP52Q8N1V2 620 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 OR10H4Q8NGA5 316 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 DNAJB8Q8NHS0 232 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 PMM1Q92871 262 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF570Q96NI8 536 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 NUSAP1Q9BXS6 441 aaKnown RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 EVLQ9UI08 416 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 MYPNQ86TC9 1320 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 H0YJX3 145 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 LSM1O15116 133 aaKnown RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 CCNCP24863 283 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 PTPN20Q4JDL3 420 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 C9orf57Q5W0N0 161 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 NAT16Q8N8M0 369 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 LRRC20Q8TCA0 184 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 CCDC107Q8WV48 283 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 LMLNQ96KR4 655 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 TBATAQ96M53 351 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 ZFP3Q96NJ6 502 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 SLC25A51Q9H1U9 297 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 MAGEE1Q9HCI5 957 aa10.49□□□□□ -0.73
CLIP1-209ENST00000537178 RUVBL1Q9Y265 456 aaKnown RBP10.49□□□□□ -0.73
CLIP1-209ENST00000537178 DCCP43146 1447 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 DCDC1P59894 354 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 AP1S1P61966 158 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ADAM17P78536 824 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 BNIP1Q12981 228 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 DUSP4Q13115 394 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 EIPR1Q53HC9 387 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PTF1AQ7RTS3 328 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CPNE9Q8IYJ1 553 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 OR2L8Q8NGY9 312 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CEP76Q8TAP6 659 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CERKQ8TCT0 537 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 TP53INP1Q96A56 240 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PIWIL1Q96J94 861 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ZNF347Q96SE7 839 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 COPS7AQ9UBW8 275 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PCDHGB1Q9Y5G3 927 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 FKBP7Q9Y680 259 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 FAM149AA5PLN7 773 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 SPATA31C2B4DYI2 1134 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GADD45GO95257 159 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 PRAMEF1O95521 474 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 LAG3P18627 525 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GTF2H2Q13888 395 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 VGLL4Q14135 290 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 UBAP2Q5T6F2 1119 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GTF2H2CQ6P1K8 395 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ZDHHC21Q8IVQ6 265 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ZFPM1Q8IX07 1006 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 SDR16C5Q8N3Y7 309 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 OR2AJ1Q8NGZ0 328 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 LCN9Q8WX39 176 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 IRGQQ8WZA9 623 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 EZH1Q92800 747 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 C8orf48Q96LL4 319 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 LENG8Q96PV6 779 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 GBA3Q9H227 469 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 OR51V1Q9H2C8 321 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 ZDHHC4Q9NPG8 344 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CHRAC1Q9NRG0 131 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 INTS10Q9NVR2 710 aaKnown RBP10.48□□□□□ -0.73
CLIP1-209ENST00000537178 TESMINQ9Y4I5 508 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 CCDC88AQ3V6T2 1871 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 A0A1W2PQH9 124 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 MEIS2O14770 477 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 B4GALT4O60513 344 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 OR7A10O76100 309 aa10.48□□□□□ -0.73
CLIP1-209ENST00000537178 RB1P06400 928 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms