RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 GUCY2DQ02846 1103 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ITIH4Q14624 930 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PLCL1Q15111 1095 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 MANEAQ5SRI9 462 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 HIBCHQ6NVY1 386 aaPredicted RBP17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 IRGCQ6NXR0 463 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CEACAM20Q6UY09 585 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 FAM92BQ6ZTR7 304 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ZNF534Q76KX8 674 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 NKD1Q969G9 470 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 HDAC10Q969S8 669 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SERPINB12Q96P63 405 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 IL22Q9GZX6 179 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 OR52A5Q9H2C5 316 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TCAF1Q9Y4C2 921 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ERVH48-1M5A8F1 160 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SLU7O95391 586 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 GOT2P00505 430 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PDHA2P29803 388 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 NSG1P42857 185 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SH3BP2P78314 561 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RHDQ02161 417 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CACHD1Q5VU97 1274 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 KIAA1614Q5VZ46 1190 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PACS1Q6VY07 963 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CAND1Q86VP6 1230 aaKnown RBP17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ZFPM2Q8WW38 1151 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TTC9Q92623 222 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ZDHHC12Q96GR4 267 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 KIR3DX1Q9H7L2 352 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SEMA5BQ9P283 1151 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SLC24A2Q9UI40 661 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PILRAQ9UKJ1 303 aa17.42■□□□□ 0.38
TNFRSF1A-209ENST00000536717 BSNQ9UPA5 3926 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 POLR1CO15160 346 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RASSF9O75901 435 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 AP2A2O94973 939 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CAV1Q03135 178 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 AFTPHQ6ULP2 937 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 LRRN4CLQ8ND94 238 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PPHLN1Q8NEY8 458 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 KLHL6Q8WZ60 621 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SLC39A7Q92504 469 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PEX13Q92968 403 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 ZPBPQ9BS86 351 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 VPS37BQ9H9H4 285 aa17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 DMGDHQ9UI17 866 aaKnown RBP17.41■□□□□ 0.38
TNFRSF1A-209ENST00000536717 OR5K3A6NET4 321 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 RAD1O60671 282 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 AVILO75366 819 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 MGAT1P26572 445 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PREPP48147 710 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TUBB4BP68371 445 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PCID2Q5JVF3 399 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TEX35Q5T0J7 233 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 KLHL35Q6PF15 583 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 NLRP9Q7RTR0 991 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PDIK1LQ8N165 341 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 LSM14AQ8ND56 463 aaKnown RBP17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 OR4L1Q8NH43 312 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SEC14L1Q92503 715 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 SGSM3Q96HU1 749 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 CHRAC1Q9NRG0 131 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 GRHL1Q9NZI5 618 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 TMEM184BQ9Y519 407 aaPredicted RBP17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 PCDHGA4Q9Y5G9 962 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 COLEC10Q9Y6Z7 277 aa17.4■□□□□ 0.38
TNFRSF1A-209ENST00000536717 IGHV5-51A0A0C4DH38 117 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ESYT3A0FGR9 886 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SDR42E2A6NKP2 422 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR1I1O60431 355 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 GSTM1P09488 218 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 RHOXF2BP0C7M4 288 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 NELFEP18615 380 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MAGEA3P43357 314 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ATP1A2P50993 1020 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 PLTPP55058 493 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ARL4CP56559 192 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CRADDP78560 199 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 GSTM4Q03013 218 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 FOXM1Q08050 763 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 RPA4Q13156 261 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SEMA3AQ14563 771 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 HIF1AQ16665 826 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 DNAJC21Q5F1R6 531 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 ARMC3Q5W041 872 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CASC4Q6P4E1 433 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TIPARPQ7Z3E1 657 aaKnown RBP17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 CACNA2D3Q8IZS8 1091 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 IL22RA1Q8N6P7 574 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 OR6C1Q96RD1 312 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 MAP3K3Q99759 626 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 RHOXF2Q9BQY4 288 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 HRASLS2Q9NWW9 162 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 SAMD15Q9P1V8 674 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 HEBP2Q9Y5Z4 205 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 BOD1L1Q8NFC6 3051 aa17.39■□□□□ 0.37
TNFRSF1A-209ENST00000536717 TK2O00142 265 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms