RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 PROS1P07225 676 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 CLCN7P51798 805 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 GPLD1P80108 840 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 CAV1Q03135 178 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 FRG1Q14331 258 aaKnown RBP17.42■□□□□ 0.38
DDX55-204ENST00000536079 GBX1Q14549 363 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 C16orf72Q14CZ0 275 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 LMNTD2Q8IXW0 634 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 AVL9Q8NBF6 648 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 SIDT2Q8NBJ9 832 aaKnown RBP17.42■□□□□ 0.38
DDX55-204ENST00000536079 ACVR1CQ8NER5 493 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 GSDMBQ8TAX9 411 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 TMEM159Q96B96 161 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 AHCYL2Q96HN2 611 aaKnown RBP17.42■□□□□ 0.38
DDX55-204ENST00000536079 HGH1Q9BTY7 390 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 XKR8Q9H6D3 395 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 KIR3DX1Q9H7L2 352 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 SATB2Q9UPW6 733 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 NFS1Q9Y697 457 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 WDFY3Q8IZQ1 3526 aa17.42■□□□□ 0.38
DDX55-204ENST00000536079 KNTC1P50748 2209 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 KRT87PA6NCN2 255 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 IFRD1O00458 451 aaPredicted RBP17.41■□□□□ 0.38
DDX55-204ENST00000536079 DUX1O43812 170 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 KIF1CO43896 1103 aaKnown RBP17.41■□□□□ 0.38
DDX55-204ENST00000536079 THRAP10827 490 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 HGFP14210 728 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 CHRM3P20309 590 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 CCKBRP32239 447 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 MAGEA4P43358 317 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 PPM1FP49593 454 aaPredicted RBP17.41■□□□□ 0.38
DDX55-204ENST00000536079 LIMK2P53671 638 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 MGAT5Q09328 741 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 GLE1Q53GS7 698 aaKnown RBP17.41■□□□□ 0.38
DDX55-204ENST00000536079 ACSBG2Q5FVE4 666 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 SNAP47Q5SQN1 464 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 PHF19Q5T6S3 580 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 TMEM71Q6P5X7 295 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 RBM12BQ8IXT5 1001 aaKnown RBP17.41■□□□□ 0.38
DDX55-204ENST00000536079 LMNTD1Q8N9Z9 388 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 OR4D9Q8NGE8 314 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 OR52E1Q8NGJ3 308 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 MDM1Q8TC05 714 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 ASZ1Q8WWH4 475 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 IFT81Q8WYA0 676 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 PANX3Q96QZ0 392 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 AARSD1Q9BTE6 412 aaKnown RBP17.41■□□□□ 0.38
DDX55-204ENST00000536079 TSSK1BQ9BXA7 367 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 LATS2Q9NRM7 1088 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 PDP2Q9P2J9 529 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 CIDEBQ9UHD4 219 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 PLAGL1Q9UM63 463 aa17.41■□□□□ 0.38
DDX55-204ENST00000536079 A8MU76 341 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 PFDN6O15212 129 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 APOA4P06727 396 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 RHOXF2BP0C7M4 288 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 AMD1P17707 334 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 CAPZBP47756 277 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 CDKN2DP55273 166 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 CYP4F3Q08477 520 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 CUL1Q13616 776 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 C3orf38Q5JPI3 329 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 WDR74Q6RFH5 385 aaPredicted RBP17.4■□□□□ 0.38
DDX55-204ENST00000536079 UNQ6494/PRO21346Q6UXR6 183 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 OTOAQ7RTW8 1153 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 PALM2Q8IXS6 379 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 ZBTB2Q8N680 514 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 OR4E2Q8NGC2 313 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 CFAP61Q8NHU2 1237 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 PPM1MQ96MI6 270 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 CNTNAP3BQ96NU0 1288 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 TGM7Q96PF1 710 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 GPR21Q99679 349 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 RHOXF2Q9BQY4 288 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 CNTNAP3Q9BZ76 1288 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 MVB12BQ9H7P6 319 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 LRRC4CQ9HCJ2 640 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 FAM114A2Q9NRY5 505 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 KLHL3Q9UH77 587 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 ASF1AQ9Y294 204 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 VPS9D1Q9Y2B5 631 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 HEBP2Q9Y5Z4 205 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 COLEC10Q9Y6Z7 277 aa17.4■□□□□ 0.38
DDX55-204ENST00000536079 KIF26BQ2KJY2 2108 aa17.39■□□□□ 0.38
DDX55-204ENST00000536079 TCRBV9S1A1TA0A576 114 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 OR6C74A6NCV1 312 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 ESPNB1AK53 854 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 F8W8V4 182 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 H3BMM5 538 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 BTN3A3O00478 584 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 CAPN5O15484 640 aaPredicted RBP17.39■□□□□ 0.37
DDX55-204ENST00000536079 C9P02748 559 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 ETV5P41161 510 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 GABREP78334 506 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 PLOD1Q02809 727 aaPredicted RBP17.39■□□□□ 0.37
DDX55-204ENST00000536079 GRB7Q14451 532 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 KRT33BQ14525 404 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 RTP5Q14D33 572 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 PLCL1Q15111 1095 aa17.39■□□□□ 0.37
DDX55-204ENST00000536079 CLPPQ16740 277 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms