RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 KDF1Q8NAX2 398 aaPredicted RBP22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 C2CD4AQ8NCU7 369 aaPredicted RBP22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 FBXO36Q8NEA4 188 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 ASZ1Q8WWH4 475 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 SEC14L1Q92503 715 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 CERS2Q96G23 380 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 MVB12BQ9H7P6 319 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 PCDHGA8Q9Y5G5 932 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 AK5Q9Y6K8 562 aa22.15■■□□□ 1.14
SFSWAP-204ENST00000535399 MN1Q10571 1320 aaPredicted RBP22.14■■□□□ 1.14
SFSWAP-204ENST00000535399 CTAGE15A4D2H0 777 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 EIF3HO15372 352 aaKnown RBP eCLIP22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 APOA4P06727 396 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 CTAGE8P0CG41 777 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 CAPZBP47756 277 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 PLTPP55058 493 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 EIF3IQ13347 325 aaKnown RBP22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 KRT33BQ14525 404 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 ZNF549Q6P9A3 640 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 RAB11FIP2Q7L804 512 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 CTAGE6Q86UF2 777 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 PLXDC1Q8IUK5 500 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 CTAGE4Q8IX94 777 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 RCBTB1Q8NDN9 531 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 FBXO25Q8TCJ0 367 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 ZMYND15Q9H091 742 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 LOXL2Q9Y4K0 774 aa22.14■■□□□ 1.13
SFSWAP-204ENST00000535399 ESYT3A0FGR9 886 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 PLD2O14939 933 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 HGSO14964 777 aaPredicted RBP22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 BRINP1O60477 761 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 DXOO77932 396 aaKnown RBP22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 HAUS5O94927 633 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 C9P02748 559 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 GFERP55789 205 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 CAV1Q03135 178 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 PLCL1Q15111 1095 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 TMED2Q15363 201 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 CNSTQ6PJW8 725 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 OTOAQ7RTW8 1153 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 ZBED8Q8IZ13 594 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 FBXO39Q8N4B4 442 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 ACVR1CQ8NER5 493 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 ZCCHC14Q8WYQ9 949 aaKnown RBP22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 SAYSD1Q9NPB0 183 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 GALPQ9UBC7 116 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 EPHA6Q9UF33 1036 aa22.13■■□□□ 1.13
SFSWAP-204ENST00000535399 APC2O95996 2303 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 AGRPO00253 132 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 KPNA5O15131 536 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 CAPN5O15484 640 aaPredicted RBP22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 HGFP14210 728 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 GABRB3P28472 473 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 LEPRP48357 1165 aaKnown RBP22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 CARSP49589 748 aaKnown RBP22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 GBX1Q14549 363 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 SNAP47Q5SQN1 464 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 PLEKHS1Q5SXH7 462 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 TEDDM1Q5T9Z0 273 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 IGF2-ASQ6U949 168 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 ARHGAP22Q7Z5H3 698 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 OR5AR1Q8NGP9 310 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 FAM136AQ96C01 138 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 CMKLR1Q99788 373 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 HGH1Q9BTY7 390 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 RAB33BQ9H082 229 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 ASCL3Q9NQ33 180 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 LATS2Q9NRM7 1088 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 SLC17A6Q9P2U8 582 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 ASF1AQ9Y294 204 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 MED16Q9Y2X0 877 aa22.12■■□□□ 1.13
SFSWAP-204ENST00000535399 CHRM3P20309 590 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 PRKG2Q13237 762 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 KLHL35Q6PF15 583 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 FOXR1Q6PIV2 292 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 KIAA0408Q6ZU52 694 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 TBC1D21Q8IYX1 336 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 LSMEM2Q8N112 164 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 OR52E1Q8NGJ3 308 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 GABPB2Q8TAK5 448 aaPredicted RBP22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 PYROXD1Q8WU10 500 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 C9orf72Q96LT7 481 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 SLC46A1Q96NT5 459 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 TGM7Q96PF1 710 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 NRTNQ99748 197 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 PHACTR1Q9C0D0 580 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 TFB2MQ9H5Q4 396 aaKnown RBP22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 MOCS1Q9NZB8 636 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 KLHL3Q9UH77 587 aa22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 MAP1BP46821 2468 aaKnown RBP22.11■■□□□ 1.13
SFSWAP-204ENST00000535399 OR5K3A6NET4 321 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 A8MU76 341 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 TAF4O00268 1085 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 CLCN7P51798 805 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 PPP1CAP62136 330 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 GUCY2DQ02846 1103 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 ABRQ12979 859 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 GALNT7Q86SF2 657 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 CEP112Q8N8E3 955 aa22.1■■□□□ 1.13
SFSWAP-204ENST00000535399 AGBL5Q8NDL9 886 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms