RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ALDH4A1P30038 563 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 DUSP4Q13115 394 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 BROXQ5VW32 411 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 PROSER1Q86XN7 944 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 RIMKLAQ8IXN7 391 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 CLDN19Q8N6F1 224 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 PAPD5Q8NDF8 572 aaKnown RBP19.01■□□□□ 0.63
CAPN1-226ENST00000533820 OR2T12Q8NG77 320 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 OR13F1Q8NGS4 319 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 SDCCAG3Q96C92 435 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 ABCG8Q9H221 673 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 TLR8Q9NR97 1041 aaKnown RBP19.01■□□□□ 0.63
CAPN1-226ENST00000533820 RAI2Q9Y5P3 530 aa19.01■□□□□ 0.63
CAPN1-226ENST00000533820 DRGXA6NNA5 263 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 HS6ST1O60243 411 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 MBL2P11226 248 aaPredicted RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF12P17014 697 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 LPOP22079 712 aaPredicted RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 SGSHP51688 502 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 FXNQ16595 210 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 NFE2Q16621 373 aaPredicted RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 SULT1C3Q6IMI6 304 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 GCNT7Q6ZNI0 430 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 GOLGA7Q7Z5G4 137 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 BTLAQ7Z6A9 289 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 GOLM1Q8NBJ4 401 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 FRS2Q8WU20 508 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF583Q96ND8 569 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 NUSAP1Q9BXS6 441 aaKnown RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 IPPKQ9H8X2 491 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 ZIM2Q9NZV7 527 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 SEPT3Q9UH03 358 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 MAGEL2Q9UJ55 1249 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 ZNF701M0R085 212 aaPredicted RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 ARVCFO00192 962 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 INSIG1O15503 277 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 KRT75O95678 551 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 B3GALT4O96024 378 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 EPOP01588 193 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 RAP2AP10114 183 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 CHRNB1P11230 501 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 YBEYP58557 167 aaPredicted RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 XAF1Q6GPH4 301 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 THAP5Q7Z6K1 395 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 C8orf59Q8N0T1 100 aaPredicted RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 EGFL8Q99944 293 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 PDFQ9HBH1 243 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 PCDHB3Q9Y5E6 796 aa19■□□□□ 0.63
CAPN1-226ENST00000533820 PRRC2BQ5JSZ5 2229 aaKnown RBP19■□□□□ 0.63
CAPN1-226ENST00000533820 STX16O14662 325 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 PRKD3O94806 890 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 TPPPO94811 219 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 ASGR1P07306 291 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 FSHRP23945 695 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 TTKP33981 857 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 PLA2G16P53816 162 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 FAM162AQ96A26 154 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 FAM193BQ96PV7 902 aaPredicted RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 TDRD1Q9BXT4 1180 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 GKN1Q9NS71 199 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 COMMD8Q9NX08 183 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 AGO1Q9UL18 857 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 GPSM3Q9Y4H4 160 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 TYW5A2RUC4 315 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 AXIN1O15169 862 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 DUSP11O75319 330 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 SEMG2Q02383 582 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 TAF1AQ15573 450 aaPredicted RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 PUS10Q3MIT2 529 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 CLLU1OSQ5K130 101 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 GALNT5Q7Z7M9 940 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 RBM23Q86U06 439 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 ISG20Q96AZ6 181 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 DOK1Q99704 481 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 AMBRA1Q9C0C7 1298 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 SLC30A1Q9Y6M5 507 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 KCNAB2Q13303 367 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 DSC3Q14574 896 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 CTU2Q2VPK5 515 aaKnown RBP18.99■□□□□ 0.63
CAPN1-226ENST00000533820 SPANXN4Q5MJ08 99 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 USP43Q70EL4 1123 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 ANKRD46Q86W74 232 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 TSPEARQ8WU66 669 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 CAPSLQ8WWF8 208 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 TAMM41Q96BW9 452 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 MUC13Q9H3R2 512 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 KLQ9UEF7 1012 aa18.99■□□□□ 0.63
CAPN1-226ENST00000533820 KRBA1A5PL33 1030 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 PSMD11O00231 422 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 OR7A17O14581 309 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 XPNPEP2O43895 674 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 ALPIP09923 528 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 CYP4B1P13584 511 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 CRHBPP24387 322 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 NKX2-5P52952 324 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-226ENST00000533820 GTF2H2Q13888 395 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 SPCS2Q15005 226 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 GTF2H2CQ6P1K8 395 aa18.98■□□□□ 0.63
CAPN1-226ENST00000533820 RSPO2Q6UXX9 243 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-226ENST00000533820 RTN4RL1Q86UN2 441 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms