RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 THAP1Q9NVV9 213 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 APPL1Q9UKG1 709 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 UBR5O95071 2799 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CLEC18AA5D8T8 446 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 MMP20O60882 483 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 GLRA3O75311 464 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 POP4O95707 220 aaKnown RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 MT-CYBP00156 380 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 JCHAINP01591 159 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 POLBP06746 335 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 PNLIPP16233 465 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 WT1P19544 449 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 NMBRP28336 390 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 TYK2P29597 1187 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 GP5P40197 560 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 ETV5P41161 510 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 MAGEA12P43365 314 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CCR10P46092 362 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CLNS1AP54105 237 aaKnown RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 GALNT2Q10471 571 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 ITGA9Q13797 1035 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 NFATC4Q14934 902 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 POLD3Q15054 466 aaPredicted RBP8.12□□□□□ -1.11
NEDD8-207ENST00000533242 IRF4Q15306 451 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 MYLK3Q32MK0 819 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 TMEM52BQ4KMG9 183 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 ANKRD20A4Q4UJ75 823 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CLEC18BQ6UXF7 455 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 STRA8Q7Z7C7 330 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 HID1Q8IV36 788 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 POU5F2Q8N7G0 328 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 DNAAF3Q8N9W5 541 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CLEC18CQ8NCF0 446 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 GPR156Q8NFN8 814 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 OR2AP1Q8NGE2 309 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 RILPQ96NA2 401 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 KLHL32Q96NJ5 620 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 RBBP8Q99708 897 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 MCMBPQ9BTE3 642 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 RETREG1Q9H6L5 497 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 CASS4Q9NQ75 786 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 FOXJ2Q9P0K8 574 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 COPG2Q9UBF2 871 aa8.12□□□□□ -1.11
NEDD8-207ENST00000533242 PTPN13Q12923 2485 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 STK10O94804 968 aaKnown RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SPTA1P02549 2419 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 UGT2B4P06133 528 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 ITIH1P19827 911 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 CNTFP26441 200 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 GKP32189 559 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 CPOXP36551 454 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SUOXP51687 545 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SERINC3Q13530 473 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 FAM219BQ5XKK7 198 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 OGFOD3Q6PK18 319 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 GDPD4Q6W3E5 623 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 OR6Y1Q8NGX8 325 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 PIWIL2Q8TC59 973 aaKnown RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 ACMSDQ8TDX5 336 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 CDKL2Q92772 493 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 TSACCQ96A04 125 aaPredicted RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 VOPP1Q96AW1 172 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 HDAC11Q96DB2 347 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 MYCBPQ99417 103 aaPredicted RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 CMKLR1Q99788 373 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SLC12A9Q9BXP2 914 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 WWP1Q9H0M0 922 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 GBA3Q9H227 469 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 DKK3Q9UBP4 350 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 TUBD1Q9UJT1 453 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 LRRC42Q9Y546 428 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 ACTL7AQ9Y615 435 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 ZFC3H1O60293 1989 aaKnown RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 C9orf172C9J069 976 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 G3V2L1 256 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 HNRNPCL1O60812 293 aaKnown RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 TNFP01375 233 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SBK3P0C264 359 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 GLB1P16278 677 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 CR2P20023 1033 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 HTR1BP28222 390 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 GABRB3P28472 473 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 PGM1P36871 562 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 ACVRL1P37023 503 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 MAPKAPK2P49137 400 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 LIMK2P53671 638 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 MAPK10P53779 464 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SRP54P61011 504 aaKnown RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 FOXK1P85037 733 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 THOC5Q13769 683 aaKnown RBP8.11□□□□□ -1.11
NEDD8-207ENST00000533242 NAA25Q14CX7 972 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 TAF11Q15544 211 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SPANXN3Q5MJ09 141 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 BORAQ6PGQ7 559 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 ENPP7Q6UWV6 458 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 SLITRK4Q8IW52 837 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 ARHGAP12Q8IWW6 846 aa8.11□□□□□ -1.11
NEDD8-207ENST00000533242 TRIM42Q8IWZ5 723 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms