RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 RAD51CO43502 376 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 KIF1CO43896 1103 aaKnown RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 OR56A5P0C7T3 313 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 PTGIRP43119 386 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 NPY2RP49146 381 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 SESN2P58004 480 aaPredicted RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 PLOD1Q02809 727 aaPredicted RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 IL11RAQ14626 422 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 FASTKD1Q53R41 847 aaKnown RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 ARMC3Q5W041 872 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 FAM92BQ6ZTR7 304 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 KMT5CQ86Y97 462 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 IFT20Q8IY31 132 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 CARFQ8N187 725 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 ZSCAN1Q8NBB4 408 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 OR6P1Q8NGX9 317 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 JPH3Q8WXH2 748 aaPredicted RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 WBP1Q96G27 269 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 ZNF778Q96MU6 729 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 BBC3Q96PG8 261 aaPredicted RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 CTRCQ99895 268 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 LRRC1Q9BTT6 524 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 MVB12BQ9H7P6 319 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 HRASLS2Q9NWW9 162 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 TLCD2A6NGC4 264 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 MATN2O00339 956 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 TTI1O43156 1089 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 RAD1O60671 282 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 KRT14P02533 472 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 NELFEP18615 380 aaKnown RBP16.22■□□□□ 0.19
PKP3-209ENST00000533069 MAP4P27816 1152 aaKnown RBP16.22■□□□□ 0.19
PKP3-209ENST00000533069 MAGEA6P43360 314 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 SEPHS1P49903 392 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 SARNPP82979 210 aaKnown RBP16.22■□□□□ 0.19
PKP3-209ENST00000533069 CAV1Q03135 178 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 FOXM1Q08050 763 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 CUL1Q13616 776 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 ARMC6Q6NXE6 501 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 LRRC8BQ6P9F7 803 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 MICALCLQ6ZW33 695 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 ZNF534Q76KX8 674 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 VASH2Q86V25 355 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 CACNA2D3Q8IZS8 1091 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 IL22RA1Q8N6P7 574 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 SEC14L1Q92503 715 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 SLC41A2Q96JW4 573 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 TSSK1BQ9BXA7 367 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 SPRY4Q9C004 299 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 TRIT1Q9H3H1 467 aaKnown RBP16.22■□□□□ 0.19
PKP3-209ENST00000533069 APMAPQ9HDC9 416 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 CHRAC1Q9NRG0 131 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 FAM114A2Q9NRY5 505 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 ASIC3Q9UHC3 531 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 ANAPC5Q9UJX4 755 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 PILRAQ9UKJ1 303 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 NEU2Q9Y3R4 380 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 TMEM184BQ9Y519 407 aaPredicted RBP16.22■□□□□ 0.19
PKP3-209ENST00000533069 PRSS21Q9Y6M0 314 aa16.22■□□□□ 0.19
PKP3-209ENST00000533069 CACNA1GO43497 2377 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 STK17BO94768 372 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 PREPP48147 710 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 TTPAP49638 278 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 PPP1CAP62136 330 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 PRKAA1Q13131 559 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 CALCOCO2Q13137 446 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 BOP1Q14137 746 aaKnown RBP16.21■□□□□ 0.19
PKP3-209ENST00000533069 MAP7Q14244 749 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 SYTL3Q4VX76 610 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 WDR93Q6P2C0 686 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 NLGN4XQ8N0W4 816 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 MPP5Q8N3R9 675 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 NLGN4YQ8NFZ3 816 aaPredicted RBP16.21■□□□□ 0.19
PKP3-209ENST00000533069 ELMO1Q92556 727 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 OR6C1Q96RD1 312 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 FERD3LQ96RJ6 166 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 MRM3Q9HC36 420 aaKnown RBP16.21■□□□□ 0.19
PKP3-209ENST00000533069 TREX1Q9NSU2 369 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 CATSPERZQ9NTU4 200 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 PCDHGA4Q9Y5G9 962 aa16.21■□□□□ 0.19
PKP3-209ENST00000533069 UBA6A0AVT1 1052 aaPredicted RBP16.2■□□□□ 0.18
PKP3-209ENST00000533069 OR6C74A6NCV1 312 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 FGF5P12034 268 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 TNFRSF8P28908 595 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 PDHA2P29803 388 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 ARL4DP49703 201 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 SH3BP2P78314 561 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 GPS1Q13098 491 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 SRSF6Q13247 344 aaKnown RBP16.2■□□□□ 0.18
PKP3-209ENST00000533069 KCNJ11Q14654 390 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.2■□□□□ 0.18
PKP3-209ENST00000533069 TAF1BQ53T94 588 aaPredicted RBP16.2■□□□□ 0.18
PKP3-209ENST00000533069 DUPD1Q68J44 220 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 CEP128Q6ZU80 1094 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 SIDT2Q8NBJ9 832 aaKnown RBP16.2■□□□□ 0.18
PKP3-209ENST00000533069 LCN9Q8WX39 176 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 SLC39A7Q92504 469 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 TTC9Q92623 222 aa16.2■□□□□ 0.18
PKP3-209ENST00000533069 TFGQ92734 400 aaPredicted RBP16.2■□□□□ 0.18
PKP3-209ENST00000533069 KIAA1143Q96AT1 154 aaPredicted RBP16.2■□□□□ 0.18
PKP3-209ENST00000533069 SNF8Q96H20 258 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms