RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 IGLV3-16A0A075B6K0 115 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 C17orf113A0A1B0GUU1 675 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 PDZK1P1A8MUH7 402 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 OR56A5P0C7T3 313 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 OGNP20774 298 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 CD82P27701 267 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 SSTR1P30872 391 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 SLC5A2P31639 672 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 HALP42357 657 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 SLC1A2P43004 574 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 MGAT5Q09328 741 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 CTBP1Q13363 440 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 TRMT10BQ6PF06 316 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 C3orf62Q6ZUJ4 267 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 ARHGAP22Q7Z5H3 698 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 CILP2Q8IUL8 1156 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 DENND6AQ8IWF6 608 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 LMNTD2Q8IXW0 634 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 CLDN19Q8N6F1 224 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 GPR150Q8NGU9 434 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 OR2L2Q8NH16 312 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 SNRNP27Q8WVK2 155 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZFPM2Q8WW38 1151 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 CCDC74BQ96LY2 380 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 TCF12Q99081 682 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 TSSK1BQ9BXA7 367 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 CCDC68Q9H2F9 335 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 FBXO6Q9NRD1 293 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZFATQ9P243 1243 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 PISDQ9UG56 409 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 FBXO5Q9UKT4 447 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 ACSL5Q9ULC5 683 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
TRAPPC4-212ENST00000533058 KIF26BQ2KJY2 2108 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 PTPRQQ9UMZ3 2332 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 B4E171 279 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 QSOX1O00391 747 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 PRMT5O14744 637 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 TOX3O15405 576 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 SGTAO43765 313 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 AP2A2O94973 939 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 C9P02748 559 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 FTH1P02794 183 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 F7P08709 466 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 GSTA2P09210 222 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 GSTM1P09488 218 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 ANKRD34CP0C6C1 535 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 HGFP14210 728 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 ITGB6P18564 788 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 ITIH1P19827 911 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 RPL10P27635 214 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 FMO4P31512 558 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 CSTF2P33240 577 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 TSPAN7P41732 249 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 PRLHRP49683 370 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 GSTM4Q03013 218 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 CLCA4Q14CN2 919 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 TMEM164Q5U3C3 297 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 BROXQ5VW32 411 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZNF449Q6P9G9 518 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 PACS1Q6VY07 963 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 ZNF761Q86XN6 746 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 PLXDC1Q8IUK5 500 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 TRIM48Q8IWZ4 208 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 GSPT2Q8IYD1 628 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 CDKL2Q92772 493 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 TAAR9Q96RI9 348 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 CCM2Q9BSQ5 444 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 RAB33BQ9H082 229 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 ANKZF1Q9H8Y5 726 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 INTS10Q9NVR2 710 aaKnown RBP12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 EPHA6Q9UF33 1036 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 GNPTGQ9UJJ9 305 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 WDR37Q9Y2I8 494 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 CRYL1Q9Y2S2 319 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 PRSS21Q9Y6M0 314 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 ITPR1Q14643 2758 aa12.65□□□□□ -0.38
TRAPPC4-212ENST00000533058 MN1Q10571 1320 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 AHCTF1Q8WYP5 2266 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 C9orf172C9J069 976 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 SPAG6O75602 509 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 FGF3P11487 239 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 CCL4P13236 92 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 ECHS1P30084 290 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 STX2P32856 288 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 PHBP35232 272 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 ETV5P41161 510 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 MPP1Q00013 466 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 NFE2L1Q14494 772 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 SEPT7Q16181 437 aaKnown RBP12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 KYNUQ16719 465 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 ERCC6LQ2NKX8 1250 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 TYSND1Q2T9J0 566 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 SYTL3Q4VX76 610 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 FAM83HQ6ZRV2 1179 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 LRRC6Q86X45 466 aa12.64□□□□□ -0.39
TRAPPC4-212ENST00000533058 DTX1Q86Y01 620 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms