RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ARNT2Q9HBZ2 717 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 C1GALT1Q9NS00 363 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 NAV2Q8IVL1 2488 aa17.32■□□□□ 0.36
PCF11-206ENST00000533018 TNRC6AQ8NDV7 1962 aaKnown RBP17.31■□□□□ 0.36
PCF11-206ENST00000533018 CCDC78A2IDD5 438 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 MATN2O00339 956 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 DNAJB5O75953 348 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 METTL18O95568 372 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 PRSS56P0CW18 603 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 PDHA2P29803 388 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 PREPP48147 710 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 FOXK1P85037 733 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 GPS2Q13227 327 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 PRKG2Q13237 762 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 PRAMEF17Q5VTA0 474 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 MICALCLQ6ZW33 695 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 SYVN1Q86TM6 617 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 CLDN19Q8N6F1 224 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 THAP4Q8WY91 577 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 CPT1BQ92523 772 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 C19orf43Q9BQ61 176 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 TMEM121Q9BTD3 319 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 NLE1Q9NVX2 485 aaPredicted RBP17.31■□□□□ 0.36
PCF11-206ENST00000533018 SMARCAL1Q9NZC9 954 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 POMT2Q9UKY4 750 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 BTRCQ9Y297 605 aa17.31■□□□□ 0.36
PCF11-206ENST00000533018 RP1L1Q8IWN7 2480 aaPredicted RBP17.31■□□□□ 0.36
PCF11-206ENST00000533018 PRRC2CQ9Y520 2896 aaKnown RBP17.31■□□□□ 0.36
PCF11-206ENST00000533018 LRRK2Q5S007 2527 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 TMEM150CB9EJG8 249 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 BTN3A3O00478 584 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 BTN3A1O00481 513 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 FTCDO95954 541 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 CYP2A7P20853 494 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 PRDX3P30048 256 aaKnown RBP17.3■□□□□ 0.36
PCF11-206ENST00000533018 GSDMDP57764 484 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 CACNG1Q06432 222 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 KIF5AQ12840 1032 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 SEMA5AQ13591 1074 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 UGT8Q16880 541 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 P3H1Q32P28 736 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 KCTD11Q693B1 232 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 HOOK3Q86VS8 718 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 AMIGO1Q86WK6 493 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 SYCE1Q8N0S2 351 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 SLC38A9Q8NBW4 561 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 OR52E1Q8NGJ3 308 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 STYXQ8WUJ0 223 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 COL26A1Q96A83 441 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 CDKN2AIPNLQ96HQ2 116 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 NRTNQ99748 197 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 BAG1Q99933 345 aaPredicted RBP17.3■□□□□ 0.36
PCF11-206ENST00000533018 HGH1Q9BTY7 390 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 KLHL25Q9H0H3 589 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 RBSNQ9H1K0 784 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 CHST8Q9H2A9 424 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 OR52A5Q9H2C5 316 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 XKR8Q9H6D3 395 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 ACSS2Q9NR19 701 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 PLAAQ9Y263 795 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 SEC16AO15027 2179 aa17.3■□□□□ 0.36
PCF11-206ENST00000533018 MED13Q9UHV7 2174 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 ARGFXA6NJG6 315 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 C2orf74A8MZ97 194 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 MIF4GDA9UHW6 222 aaKnown RBP17.29■□□□□ 0.36
PCF11-206ENST00000533018 MEN1O00255 615 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 PSMD3O43242 534 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 ST6GAL1P15907 406 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 CD151P48509 253 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 LMAN1P49257 510 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 CCL11P51671 97 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 GDF10P55107 478 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 MLLT10P55197 1068 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 CHAF1BQ13112 559 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 BRD3Q15059 726 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 APLFQ8IW19 511 aaPredicted RBP17.29■□□□□ 0.36
PCF11-206ENST00000533018 TXLNBQ8N3L3 684 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 TFGQ92734 400 aaPredicted RBP17.29■□□□□ 0.36
PCF11-206ENST00000533018 N4BP2L2Q92802 583 aaPredicted RBP17.29■□□□□ 0.36
PCF11-206ENST00000533018 TRIM55Q9BYV6 548 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 TFB2MQ9H5Q4 396 aaKnown RBP17.29■□□□□ 0.36
PCF11-206ENST00000533018 MVB12BQ9H7P6 319 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 LATS2Q9NRM7 1088 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 SERTAD3Q9UJW9 196 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 SNX7Q9UNH6 387 aa17.29■□□□□ 0.36
PCF11-206ENST00000533018 R3HDM2Q9Y2K5 976 aaKnown RBP17.29■□□□□ 0.36
PCF11-206ENST00000533018 IGLV3-16A0A075B6K0 115 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 TRBV5-4A0A0C4DH59 114 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 H7C0S8 307 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 ABRQ12979 859 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 RPA4Q13156 261 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 IL10RAQ13651 578 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 UBAP2LQ14157 1087 aaKnown RBP17.28■□□□□ 0.36
PCF11-206ENST00000533018 DBN1Q16643 649 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 CCDC38Q502W7 563 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 PLEKHS1Q5SXH7 462 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 IZUMO3Q5VZ72 239 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 CPZQ66K79 652 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 PIANPQ8IYJ0 282 aa17.28■□□□□ 0.36
PCF11-206ENST00000533018 DSELQ8IZU8 1212 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms