RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 ANKRD28O15084 1053 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 ITM2AO43736 263 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 RAB40ALP0C0E4 278 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 FGF3P11487 239 aaPredicted RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 P4HA1P13674 534 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 TCF4P15884 667 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 CYP11B2P19099 503 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 KCNA5P22460 613 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 HOXA11P31270 313 aaPredicted RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 SOAT1P35610 550 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 KHKP50053 298 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 ASCL1P50553 236 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 YBEYP58557 167 aaPredicted RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 TAS2R38P59533 333 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 ZP1P60852 638 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 POLR2LP62875 67 aaKnown RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 CTTNQ14247 550 aaKnown RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 ZNF284Q2VY69 593 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 KBTBD12Q3ZCT8 623 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 SLC39A12Q504Y0 691 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 DNAJC21Q5F1R6 531 aaKnown RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 WASHC2DQ5SRD0 308 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 DCAF12L2Q5VW00 463 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 C18orf63Q68DL7 685 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 TMEM270Q6UE05 265 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 PARM1Q6UWI2 310 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 ZNF367Q7RTV3 350 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 TLK2Q86UE8 772 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 ZC3HC1Q86WB0 502 aaKnown RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 ERC1Q8IUD2 1116 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 SPATA2LQ8IUW3 424 aaPredicted RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 FAM219AQ8IW50 185 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 OR7G3Q8NG95 312 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 UTP15Q8TED0 518 aaKnown RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 RND1Q92730 232 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 INPP5DQ92835 1189 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 NEUROG1Q92886 237 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 TEKT1Q969V4 418 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 MED30Q96HR3 178 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 KXD1Q9BQD3 176 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 XPO4Q9C0E2 1151 aaKnown RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 SLC5A7Q9GZV3 580 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 RBM38Q9H0Z9 239 aaKnown RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 THAP9Q9H5L6 903 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 C17orf75Q9HAS0 396 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 DPP3Q9NY33 737 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 AKAP7Q9P0M2 348 aaPredicted RBP4.26□□□□□ -1.73
USP47-211ENST00000531513 TBC1D7Q9P0N9 293 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 TINAGQ9UJW2 476 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 PCDHA7Q9UN72 937 aa4.26□□□□□ -1.73
USP47-211ENST00000531513 SPAG9O60271 1321 aaKnown RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 ATXN2Q99700 1313 aaKnown RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 TMEM221A6NGB7 291 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 I6L893 689 aaPredicted RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 EIF3DO15371 548 aaKnown RBP eCLIP4.25□□□□□ -1.73
USP47-211ENST00000531513 XRCC3O43542 346 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 B3GALNT1O75752 331 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 DDNO94850 711 aaPredicted RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 RLN1P04808 185 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 HMOX1P09601 288 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 OR2T7P0C7T2 308 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 AZGP1P25311 298 aaKnown RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 TIA1P31483 386 aaKnown RBP eCLIP4.25□□□□□ -1.73
USP47-211ENST00000531513 WNT5AP41221 380 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 KCNJ1P48048 391 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 PTENP60484 403 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 ST8SIA6P61647 398 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 IL1RL1Q01638 556 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 PRKCZQ05513 592 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TEFQ10587 303 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 PPA1Q15181 289 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TAZQ16635 292 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 CDO1Q16878 200 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 KCNT1Q5JUK3 1230 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 SLC27A1Q6PCB7 646 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TRAPPC11Q7Z392 1133 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 ATG9AQ7Z3C6 839 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 NR2C2APQ86WQ0 139 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 C4orf19Q8IY42 314 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 PM20D2Q8IYS1 436 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 SLC5A8Q8N695 610 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TEX9Q8N6V9 391 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 UXS1Q8NBZ7 420 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 DBF4BQ8NFT6 615 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 OR2AJ1Q8NGZ0 328 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 HMGCLL1Q8TB92 370 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 ZFAND2BQ8WV99 257 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 HEXDCQ8WVB3 486 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 NUDCD2Q8WVJ2 157 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 DNAAF4Q8WXU2 420 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 NSMAFQ92636 917 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 OTUB1Q96FW1 271 aaPredicted RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 FAM81BQ96LP2 452 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 APOLD1Q96LR9 279 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 TMEM237Q96Q45 408 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 HNRNPABQ99729 332 aaKnown RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 CPNE1Q99829 537 aa4.25□□□□□ -1.73
USP47-211ENST00000531513 NTPCRQ9BSD7 190 aaKnown RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 MMTAG2Q9BU76 263 aaKnown RBP4.25□□□□□ -1.73
USP47-211ENST00000531513 ZNF350Q9GZX5 532 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms