RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 BEST3Q8N1M1 668 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 BOLLQ8N9W6 283 aaKnown RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 SLC38A9Q8NBW4 561 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 ENGASEQ8NFI3 743 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 DBF4BQ8NFT6 615 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 B4GALNT2Q8NHY0 566 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 KIAA1524Q8TCG1 905 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 SLC13A3Q8WWT9 602 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 RAD54LQ92698 747 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 RIT1Q92963 219 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 SYAP1Q96A49 352 aaPredicted RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 CENPTQ96BT3 561 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 THOC1Q96FV9 657 aaKnown RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 BICD1Q96G01 975 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 CDKN2AIPNLQ96HQ2 116 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 FAM111AQ96PZ2 611 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 MTERF1Q99551 399 aaKnown RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 CMKLR1Q99788 373 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 C16orf70Q9BSU1 422 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 TRMOQ9BU70 441 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 TEX13AQ9BXU3 409 aaPredicted RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 NAPBQ9H115 298 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 CLK4Q9HAZ1 481 aaKnown RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 MMP25Q9NPA2 562 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 SEMA4GQ9NTN9 838 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 MIOSQ9NXC5 875 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 HMG20BQ9P0W2 317 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 FETUBQ9UGM5 382 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 APPL1Q9UKG1 709 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 BLOC1S6Q9UL45 172 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 CCPG1Q9ULG6 757 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 RNF150Q9ULK6 438 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 ABT1Q9ULW3 272 aaKnown RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 AURKCQ9UQB9 309 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 PIN4Q9Y237 131 aaKnown RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 STRAPQ9Y3F4 350 aaKnown RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 KIF3AQ9Y496 699 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 TMEM184BQ9Y519 407 aaPredicted RBP2.03□□□□□ -2.08
FGFR1-235ENST00000530701 SNX9Q9Y5X1 595 aa2.03□□□□□ -2.08
FGFR1-235ENST00000530701 ZMYM2Q9UBW7 1377 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 TTC3P53804 2025 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 ASTN2O75129 1339 aaPredicted RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 PTPRCP08575 1304 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 NPHP3Q7Z494 1330 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 A0A087X1B8 175 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 TRBV2A0A0J9YWF9 115 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 TMEM272A0A1B0GTI8 110 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 PRSS51A0A1B0GVH4 220 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 A0A1W2PPC1 479 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 ELOVL7A1L3X0 281 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 HYKKA2RU49 373 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 NEMP2A6NFY4 417 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 MANSC4A6NHS7 340 aaPredicted RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 ARHGAP42A6NI28 874 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SLC9B1P1A6NJY1 282 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 DUXAA6NLW8 204 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 H0YGN5 161 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SOCS6O14544 535 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 PTGESO14684 152 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 RASGRF2O14827 1237 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 TO15178 435 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 FOXN1O15353 648 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 LDB2O43679 373 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 TLX3O43711 291 aaPredicted RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 NARSO43776 548 aaKnown RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 GPR137BO60478 399 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 FOXD2O60548 495 aaPredicted RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 TLR2O60603 784 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SELENOFO60613 162 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 FCGR3BO75015 233 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 NDUFS7O75251 213 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SERPINI2O75830 405 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 AKAP3O75969 853 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 GLCEO94923 617 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 NDUFB8O95169 186 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 TRIM16O95361 564 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SLC16A8O95907 504 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 GAS8O95995 478 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 MT-ATP6P00846 226 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 LDLRP01130 860 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 PRKCGP05129 697 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SERPING1P05155 500 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 ALPPP05187 535 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 STAG3L1P0CL83 205 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 ALPPL2P10696 532 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 GHRP10912 638 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 CYP19A1P11511 503 aaPredicted RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 ZNF18P17022 549 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 CYP11B2P19099 503 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 POLR2CP19387 275 aaPredicted RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 CD22P20273 847 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 GNLYP22749 145 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 MPGP29372 298 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SLC6A6P31641 620 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 APOBEC1P41238 236 aaKnown RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 ASMTP46597 345 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 SERPINH1P50454 418 aaKnown RBP2.02□□□□□ -2.09
FGFR1-235ENST00000530701 PDX1P52945 283 aa2.02□□□□□ -2.09
FGFR1-235ENST00000530701 NUDT6P53370 316 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms