RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DUPD1Q68J44 220 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ZNF470Q6ECI4 717 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 UNC5BQ8IZJ1 945 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 AGBL5Q8NDL9 886 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ACVR1CQ8NER5 493 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CALML6Q8TD86 181 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ASZ1Q8WWH4 475 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 JPH3Q8WXH2 748 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 RSC1A1Q92681 617 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 FGF11Q92914 225 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 MVB12BQ9H7P6 319 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 WHRNQ9P202 907 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 CRYL1Q9Y2S2 319 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 TEX264Q9Y6I9 313 aa12.35□□□□□ -0.43
CCDC90B-216ENST00000529856 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 E7ESA3 106 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 H3BMM5 538 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 AGRPO00253 132 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 KPNA5O15131 536 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 SLCO2B1O94956 709 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 CCL4P13236 92 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 PKMP14618 531 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 ITIH1P19827 911 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 CSTF2P33240 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 ETV5P41161 510 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 SLC1A2P43004 574 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 LEPRP48357 1165 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 CSE1LP55060 971 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 HSP90AA5PQ58FG0 334 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 HP1BP3Q5SSJ5 553 aaPredicted RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 KLHL35Q6PF15 583 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 CLEC14AQ86T13 490 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 KCNMB4Q86W47 210 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 VRK3Q8IV63 474 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 DENND6AQ8IWF6 608 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 SLC22A15Q8IZD6 547 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 SNIP1Q8TAD8 396 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 ZDHHC12Q96GR4 267 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 TGM7Q96PF1 710 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 WDR83Q9BRX9 315 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 FAM167BQ9BTA0 163 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 DPH5Q9H2P9 285 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 TFB2MQ9H5Q4 396 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 PLAC1Q9HBJ0 212 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 LATS2Q9NRM7 1088 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 THSD1Q9NS62 852 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 IARS2Q9NSE4 1012 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 PISDQ9UG56 409 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 ZC3H7BQ9UGR2 993 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 KLHL3Q9UH77 587 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 FBXO5Q9UKT4 447 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 CHMP2BQ9UQN3 213 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 RAXQ9Y2V3 346 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 UTP11Q9Y3A2 253 aaKnown RBP12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 PCDHGA7Q9Y5G6 932 aa12.34□□□□□ -0.43
CCDC90B-216ENST00000529856 OR5K3A6NET4 321 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 B4E171 279 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 NVLO15381 856 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 TOX3O15405 576 aaPredicted RBP12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 NIPSNAP2O75323 286 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 ANKRD34CP0C6C1 535 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 ERVK-10P10266 1014 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 FGF3P11487 239 aaPredicted RBP12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 TSPAN7P41732 249 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 PDIA2Q13087 525 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 CALCOCO2Q13137 446 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 PRKG2Q13237 762 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 TMED2Q15363 201 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 PLEKHS1Q5SXH7 462 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 STEAP4Q687X5 459 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 UNC5AQ6ZN44 842 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 OTOAQ7RTW8 1153 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 OOSP2Q86WS3 158 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 ANKMY2Q8IV38 441 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 OR4E2Q8NGC2 313 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 OR5AR1Q8NGP9 310 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 OR5K2Q8NHB8 316 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 LCN9Q8WX39 176 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 B3GNT4Q9C0J1 378 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 RAB17Q9H0T7 212 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 TRIT1Q9H3H1 467 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 FBXO6Q9NRD1 293 aaPredicted RBP12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 HRASLS2Q9NWW9 162 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 GRHL1Q9NZI5 618 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 SEMA5BQ9P283 1151 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 POLG2Q9UHN1 485 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 ASF1AQ9Y294 204 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 URB1O60287 2271 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 APC2O95996 2303 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 ACACAQ13085 2346 aa12.33□□□□□ -0.44
CCDC90B-216ENST00000529856 OR6C74A6NCV1 312 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 EFCAB7A8K855 629 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 KIF1CO43896 1103 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 HAUS5O94927 633 aa12.32□□□□□ -0.44
CCDC90B-216ENST00000529856 F7P08709 466 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms