RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 IFT80Q9P2H3 777 aaPredicted RBP12.6□□□□□ -0.39
CLNS1A-207ENST00000527133 COPG2Q9UBF2 871 aa12.6□□□□□ -0.39
CLNS1A-207ENST00000527133 NDOR1Q9UHB4 597 aa12.6□□□□□ -0.39
CLNS1A-207ENST00000527133 FER1L5A0AVI2 2057 aa12.6□□□□□ -0.39
CLNS1A-207ENST00000527133 A0A0A6YYK5 440 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 BTN3A3O00478 584 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 BTN3A1O00481 513 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 GAPDHSO14556 408 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 PROSCO94903 275 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 ITGA3P26006 1051 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 CHRNA4P43681 627 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 SOX8P57073 446 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 ITGA9Q13797 1035 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 PDK1Q15118 436 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 ZXDCQ2QGD7 858 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 SIRPB2Q5JXA9 342 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 NPNTQ6UXI9 565 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 RBM43Q6ZSC3 357 aaKnown RBP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 GLT6D1Q7Z4J2 308 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 TMEM151BQ8IW70 566 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 CFAP206Q8IYR0 622 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 LILRA3Q8N6C8 439 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 OR2Y1Q8NGV0 311 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 BLOC1S5Q8TDH9 187 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 PPP4R1Q8TF05 950 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 FAR1Q8WVX9 515 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 N4BP2L2Q92802 583 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 CDYLQ9Y232 598 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 HEBP2Q9Y5Z4 205 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
CLNS1A-207ENST00000527133 A0A1B0GUH1 482 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 HEATR9A2RTY3 570 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 CCDC66A2RUB6 948 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 PPP1R12AO14974 1030 aaPredicted RBP12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 CNOT3O75175 753 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 ALOX12BO75342 701 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 OR2B3O76000 313 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 UMODP07911 640 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 KDELR1P24390 212 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 TSFMP43897 325 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 WNT3AP56704 352 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 CDC16Q13042 620 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 NFKBIBQ15653 356 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 DEFB110Q30KQ9 67 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 DNAJB14Q8TBM8 379 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 PTERQ96BW5 349 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 CNDP1Q96KN2 507 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 FERD3LQ96RJ6 166 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 SPRTNQ9H040 489 aaPredicted RBP12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 SMOXQ9NWM0 555 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 CHMP5Q9NZZ3 219 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 PKP3Q9Y446 797 aa12.58□□□□□ -0.4
CLNS1A-207ENST00000527133 MTORP42345 2549 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 A0A087X0T9 212 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 LOC285095A0A1B0GVY8 99 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 A0A1W2PQJ5 194 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 LRRD1A4D1F6 860 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 KLHL33A6NCF5 533 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 C2orf74A8MZ97 194 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 AGPSO00116 658 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 APOL1O14791 398 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 PRAMEF1O95521 474 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 STSP08842 583 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 CD63P08962 238 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 FAM228BP0C875 321 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 TNNT3P45378 269 aaPredicted RBP12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 PTPRCAPQ14761 206 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 ZNF169Q14929 603 aaPredicted RBP12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 BCL7AQ4VC05 210 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 TEX44Q53QW1 395 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 SLC9A4Q6AI14 798 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 RHBDD2Q6NTF9 364 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 KDELC1Q6UW63 502 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 GDF7Q7Z4P5 450 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 TRIM73Q86UV7 250 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 PROKR1Q8TCW9 393 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 ZNF398Q8TD17 642 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 RBM41Q96IZ5 413 aaKnown RBP12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 OLFM3Q96PB7 478 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 CCM2Q9BSQ5 444 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 AP1M1Q9BXS5 423 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 XKR8Q9H6D3 395 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 FAM60AQ9NP50 221 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 ACTR10Q9NZ32 417 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 HACD3Q9P035 362 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 CTTNBP2NLQ9P2B4 639 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 DHCR7Q9UBM7 475 aaKnown RBP12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 FAM153AQ9UHL3 310 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 FBXL4Q9UKA2 621 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 ITGB1BP2Q9UKP3 347 aa12.57□□□□□ -0.4
CLNS1A-207ENST00000527133 AP1M2Q9Y6Q5 423 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms