RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 A0A0J9YYE9 177 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 C9J4A7 227 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 KMOO15229 486 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 DNAJC6O75061 913 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CLDN7O95471 211 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 TRBC1P01850 177 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 FUCA1P04066 466 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 MYBL1P10243 752 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF28P17035 718 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CHRNB2P17787 502 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 PI3P19957 117 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 IDSP22304 550 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 F8A1P23610 371 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 RPL10P27635 214 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 PTPN4P29074 926 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 LEPRP48357 1165 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 HCAR3P49019 387 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 KLK7P49862 253 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 STC1P52823 247 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 GSDMDP57764 484 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 RPL26P61254 145 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 YBX1P67809 324 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 SRSF3P84103 164 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 PTP4A2Q12974 167 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CHAF1BQ13112 559 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 DPYSQ14117 519 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 KRT33BQ14525 404 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 KRT31Q15323 416 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 ASIC2Q16515 512 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CA9Q16790 459 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 HADHQ16836 314 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 ODF2Q5BJF6 829 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 DNTTIP2Q5QJE6 756 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CPZQ66K79 652 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CCDC70Q6NSX1 233 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 TECPR1Q7Z6L1 1165 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 TMEM135Q86UB9 458 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 HOOK3Q86VS8 718 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 RAB43Q86YS6 212 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 TMEM151BQ8IW70 566 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 RAVER1Q8IY67 606 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 IQCKQ8N0W5 287 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 FBXO27Q8NI29 283 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 VOPP1Q96AW1 172 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 SGSM3Q96HU1 749 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 COX14Q96I36 57 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 SIGLEC10Q96LC7 697 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 PCDHB18PQ96TA0 734 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 ZSCAN5AQ9BUG6 496 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 MLPHQ9BV36 600 aaPredicted RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 BRD8Q9H0E9 1235 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CLSTN2Q9H4D0 955 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 FAM83DQ9H4H8 585 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 UCK1Q9HA47 277 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 PCDH9Q9HC56 1237 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 WASH6PQ9NQA3 447 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 SAMSN1Q9NSI8 373 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 SIDT1Q9NXL6 827 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 GPR83Q9NYM4 423 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 LUZP4Q9P127 313 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 RPL26L1Q9UNX3 145 aaKnown RBP6.11□□□□□ -1.43
PABPC1-220ENST00000522658 CHKBQ9Y259 395 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 PADI2Q9Y2J8 665 aa6.11□□□□□ -1.43
PABPC1-220ENST00000522658 ARHGEF17Q96PE2 2063 aaPredicted RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 RGSL1A5PLK6 1076 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TLCD2A6NGC4 264 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 SLC22A31A6NKX4 558 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 A6NL46 340 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 LGALS16A8MUM7 142 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 K7EM74 188 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF185O15231 689 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 SCRG1O75711 98 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CDK14O94921 469 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 EML2O95834 649 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 RECKO95980 971 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 SOD1P00441 154 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 C9P02748 559 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 FGF5P12034 268 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 ZNF7P17097 686 aaPredicted RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 NELFEP18615 380 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 XRCC1P18887 633 aaPredicted RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CYP2A7P20853 494 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 TNFRSF8P28908 595 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 SPINT3P49223 89 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 RPS18P62269 152 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 UBE2IP63279 158 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 CDK18Q07002 472 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 PRKAA1Q13131 559 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 MAMLD1Q13495 774 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 INPP5JQ15735 1006 aaPredicted RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 DPYSL2Q16555 572 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 EIF2S3LQ2VIR3 472 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 BBS9Q3SYG4 887 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 NADK2Q4G0N4 442 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 BOLA3Q53S33 107 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 ZRANB3Q5FWF4 1079 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 HENMT1Q5T8I9 393 aaKnown RBP6.1□□□□□ -1.43
PABPC1-220ENST00000522658 IRAK1BP1Q5VVH5 260 aa6.1□□□□□ -1.43
PABPC1-220ENST00000522658 PDPK2PQ6A1A2 396 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms