RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 SPAARA0A1B0GVQ0 90 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 GIPC1O14908 333 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 NOBOXO60393 691 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 C2P06681 752 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 GSTM1P09488 218 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 CREB1P16220 341 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 KRT15P19012 456 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 RPIAP49247 311 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 MAZP56270 477 aaKnown RBP14.98□□□□□ -0.01
LSM1-203ENST00000520755 GSTM4Q03013 218 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 PDAP1Q13442 181 aaKnown RBP14.98□□□□□ -0.01
LSM1-203ENST00000520755 TRIP6Q15654 476 aaKnown RBP14.98□□□□□ -0.01
LSM1-203ENST00000520755 TTMPQ5BVD1 217 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 LGSNQ5TDP6 509 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 OTOAQ7RTW8 1153 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 CLEC14AQ86T13 490 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 NAGSQ8N159 534 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 INPP5DQ92835 1189 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 TSPAN17Q96FV3 270 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 TSSK1BQ9BXA7 367 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 PCMTD2Q9NV79 361 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 DLL3Q9NYJ7 618 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 KLHL42Q9P2K6 505 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 PSMD13Q9UNM6 376 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 PCNX2A6NKB5 2137 aa14.98□□□□□ -0.01
LSM1-203ENST00000520755 CEP250Q9BV73 2442 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 GOLGA4Q13439 2230 aaKnown RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 A0A096LPK6 155 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 LY6G6EA0A0G2JKS1 128 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 CPED1A4D0V7 1026 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 KLHL33A6NCF5 533 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 A6NCN8 305 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 GOLGA8RI6L899 631 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 LIN7AO14910 233 aaPredicted RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 RGS16O15492 202 aaPredicted RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 TNFSF14O43557 240 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 SLCO2B1O94956 709 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 KCNK5O95279 499 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 SYF2O95926 243 aaKnown RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 MYZAPP0CAP1 466 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 CEACAM1P13688 526 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 F3P13726 295 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 CKMT2P17540 419 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 TYK2P29597 1187 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 PDHA2P29803 388 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 SLC12A2P55011 1212 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 HSPA14Q0VDF9 509 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 SYTL3Q4VX76 610 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 C14orf28Q4W4Y0 310 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 CCDC157Q569K6 752 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 PLEKHS1Q5SXH7 462 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 METRNLQ641Q3 311 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 OGFOD3Q6PK18 319 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 PIWIL4Q7Z3Z4 852 aaKnown RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 CROCCP2Q86T23 111 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 PLD6Q8N2A8 252 aaKnown RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 GPR156Q8NFN8 814 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 MAPK15Q8TD08 544 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 TLCD1Q96CP7 247 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 UBXN10Q96LJ8 280 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 RMDN2Q96LZ7 410 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 UNKQ9C0B0 810 aaKnown RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 OR52A5Q9H2C5 316 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 CENPHQ9H3R5 247 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 GPAMQ9HCL2 828 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 IGSF5Q9NSI5 407 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 EVA1BQ9NVM1 165 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 NCKIPSDQ9NZQ3 722 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 TSR3Q9UJK0 312 aaKnown RBP14.97□□□□□ -0.01
LSM1-203ENST00000520755 PADI4Q9UM07 663 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 WDR37Q9Y2I8 494 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 U3KQA8 63 aa14.97□□□□□ -0.01
LSM1-203ENST00000520755 APOA4P06727 396 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 SLC35G4P0C7Q5 338 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 PYGBP11216 843 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 CKMT1AP12532 417 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 SLC2A4P14672 509 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 CRABP2P29373 138 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 ATP5DP30049 168 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 HALP42357 657 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 DUSP3P51452 185 aaPredicted RBP14.96□□□□□ -0.01
LSM1-203ENST00000520755 BIRC2Q13490 618 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 PUM1Q14671 1186 aaKnown RBP eCLIP14.96□□□□□ -0.01
LSM1-203ENST00000520755 UGT3A1Q6NUS8 523 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 GUSBP11Q6P575 273 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 IYDQ6PHW0 289 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 EXOC3L1Q86VI1 746 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 SRRM1Q8IYB3 904 aaKnown RBP14.96□□□□□ -0.01
LSM1-203ENST00000520755 SLC22A15Q8IZD6 547 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 C4orf33Q8N1A6 199 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 ARL14Q8N4G2 192 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 SPATA6LQ8N4H0 392 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 SLC37A2Q8TED4 501 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 EEF1AKMT1Q8WVE0 214 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 KCTD4Q8WVF5 259 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 LINGO1Q96FE5 620 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 WWP1Q9H0M0 922 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 VPS11Q9H270 941 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 ZNF358Q9NW07 568 aa14.96□□□□□ -0.01
LSM1-203ENST00000520755 SCHIP1Q9P0W5 487 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms