RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 CDH1P12830 882 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF12P17014 697 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 CES1P23141 567 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 DCKP27707 260 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 HTR1EP28566 365 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 EEF1DP29692 281 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 GSK3BP49841 420 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 EPHB3P54753 998 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 CDKN2DP55273 166 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 TPD52P55327 224 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 ERVK-8P63133 956 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 CYP4F8P98187 520 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 CLCQ05315 142 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 TOP3AQ13472 1001 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 LRRC32Q14392 662 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 GK3PQ14409 553 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 SF3A2Q15428 464 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 TRIP4Q15650 581 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 RBBP7Q16576 425 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 RBM48Q5RL73 367 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 UGT3A1Q6NUS8 523 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 ZNF773Q6PK81 442 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 RTL10Q7L3V2 364 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC15A3Q8IY34 581 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 RYBPQ8N488 228 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 OR9I1Q8NGQ6 314 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 OR4L1Q8NH43 312 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 BRSK1Q8TDC3 778 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 NETO1Q8TDF5 533 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 ANKRD49Q8WVL7 239 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 TMEM125Q96AQ2 219 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 TADA1Q96BN2 335 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 HMCESQ96FZ2 354 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 C8orf48Q96LL4 319 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 NSMCE2Q96MF7 247 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 PLEKHG4BQ96PX9 1271 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 TMEM209Q96SK2 561 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 CDK5RAP1Q96SZ6 601 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 PKMYT1Q99640 499 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 SEPT5Q99719 369 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 LRRC3Q9BY71 257 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 UNKQ9C0B0 810 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 BRINP2Q9C0B6 783 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 ZCWPW1Q9H0M4 648 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 SMG9Q9H0W8 520 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 CRISPLD1Q9H336 500 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 SMOC1Q9H4F8 434 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 PREBQ9HCU5 417 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 OLAHQ9NV23 265 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 SMOXQ9NWM0 555 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 COMMD8Q9NX08 183 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 DUS2Q9NX74 493 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 NUDT4Q9NZJ9 180 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 TRMT6Q9UJA5 497 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 RALYQ9UKM9 306 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 DNAJC15Q9Y5T4 150 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 PTPRDP23468 1912 aa8.5□□□□□ -1.05
CTNNA1-223ENST00000520520 RALGAPA1Q6GYQ0 2036 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 KIF26AQ9ULI4 1882 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 IGLV3-10A0A075B6K4 115 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ATP6AP2A0A1C7CYW4 349 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 A0A1W2PQH9 124 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 C2orf81A6NN90 581 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 FXYD1O00168 92 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 UBFD1O14562 309 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 AURKAO14965 403 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 MSI1O43347 362 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ATP6AP2O75787 350 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 GOT2P00505 430 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 HNRNPCP07910 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ATXN1LP0C7T5 689 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 PRR35P0CG20 571 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 CKMT2P17540 419 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 CAPN3P20807 821 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 CD9P21926 228 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SLC6A2P23975 617 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 GABRR2P28476 465 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 MAGEA11P43364 429 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 TTPAP49638 278 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 HLCSP50747 726 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 POLR2JP52435 117 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 TMBIM6P55061 237 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 GABARAPL2P60520 117 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 DSC2Q02487 901 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 LIPEQ05469 1076 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 PRKG2Q13237 762 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 MAD2L1Q13257 205 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 MRPL58Q14197 206 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 POLD3Q15054 466 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 TAF12Q16514 161 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 PFKFB4Q16877 469 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 UGT3A2Q3SY77 523 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 ATP6AP1LQ52LC2 224 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 FAM98BQ52LJ0 330 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 BROXQ5VW32 411 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 TTC23Q5W5X9 447 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 IL31Q6EBC2 164 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 GPRIN3Q6ZVF9 776 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 SPPL2CQ8IUH8 684 aa8.49□□□□□ -1.05
CTNNA1-223ENST00000520520 FUNDC1Q8IVP5 155 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms