RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ZNF217O75362 1048 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 KRT36O76013 467 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 SLCO2B1O94956 709 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 CH25HO95992 272 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 BCL10O95999 233 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 PNPP00491 289 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 PENKP01210 267 aaPredicted RBP3.94□□□□□ -1.78
SQLE-204ENST00000520493 SUPT20HL2P0C7V6 817 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ACHEP22303 614 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 AMPHP49418 695 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 CLCNKAP51800 687 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ZNF75DP51815 510 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 CTSCP53634 463 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ACTN3Q08043 901 aaPredicted RBP3.94□□□□□ -1.78
SQLE-204ENST00000520493 TRAF3Q13114 568 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 SNTA1Q13424 505 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ZNF718Q3SXZ3 478 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ZNF672Q499Z4 452 aaPredicted RBP3.94□□□□□ -1.78
SQLE-204ENST00000520493 ANKRD20A4Q4UJ75 823 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ATP13A5Q4VNC0 1218 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ANKRD20A8PQ5CZ79 823 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ANKRD20A2Q5SQ80 823 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 C6orf136Q5SQH8 315 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ANKRD20A1Q5TYW2 823 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ANKRD20A3Q5VUR7 823 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 PLA2G4FQ68DD2 849 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 C18orf63Q68DL7 685 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 CHERPQ8IWX8 916 aaKnown RBP3.94□□□□□ -1.78
SQLE-204ENST00000520493 ZNF619Q8N2I2 560 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 RASGEF1CQ8N431 466 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 AFAP1Q8N556 730 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 PCDH20Q8N6Y1 951 aaKnown RBP3.94□□□□□ -1.78
SQLE-204ENST00000520493 ATAD1Q8NBU5 361 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 KRT35Q92764 455 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 ATP6V0A1Q93050 837 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 MTBPQ96DY7 904 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 GRAMD2BQ96HH9 432 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 MS4A10Q96PG2 267 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 DDOQ99489 341 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 GFI1Q99684 422 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 CHCHD3Q9NX63 227 aaKnown RBP3.94□□□□□ -1.78
SQLE-204ENST00000520493 RCC2Q9P258 522 aaKnown RBP3.94□□□□□ -1.78
SQLE-204ENST00000520493 STK26Q9P289 416 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 MOSPD1Q9UJG1 213 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 DOCK7Q96N67 2140 aa3.94□□□□□ -1.78
SQLE-204ENST00000520493 A0A0U1RQJ8 604 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 BUB3O43684 328 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 ZBTB14O43829 449 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 KINO60870 393 aaKnown RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 KERAO60938 352 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 NDUFS7O75251 213 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 RTN2O75298 545 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 ZFYP08048 801 aaPredicted RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 DANCRP0C864 163 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 P4HA1P13674 534 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 KCNA5P22460 613 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 EEF1B2P24534 225 aaKnown RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 HRH2P25021 359 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 NAGLUP54802 743 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 TAS2R38P59533 333 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 CDK3Q00526 305 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 HSPB3Q12988 150 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 ITGA7Q13683 1181 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 MELKQ14680 651 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SF3B4Q15427 424 aaKnown RBP eCLIP3.93□□□□□ -1.785e-7■□□□□ 10
SQLE-204ENST00000520493 CTF1Q16619 201 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SFMBT2Q5VUG0 894 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 GSG1LQ6UXU4 331 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SLC36A4Q6YBV0 504 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 ZNF534Q76KX8 674 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 CATSPER4Q7RTX7 472 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 CENPVQ7Z7K6 275 aaPredicted RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 FOXP4Q8IVH2 680 aaPredicted RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 MFN1Q8IWA4 741 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 TIGD4Q8IY51 512 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 PM20D2Q8IYS1 436 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 LILRB1Q8NHL6 650 aaPredicted RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 CTCFLQ8NI51 663 aaPredicted RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 HES6Q96HZ4 224 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 RMDN2Q96LZ7 410 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 OR1F2PQ96R84 312 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SEMA3CQ99985 751 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SLX1AQ9BQ83 275 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 ABHD6Q9BV23 337 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SPRY4Q9C004 299 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 WNT5BQ9H1J7 359 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SEBOXQ9HB31 216 aaPredicted RBP3.93□□□□□ -1.78
SQLE-204ENST00000520493 EQTNQ9NQ60 294 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 ABCB8Q9NUT2 735 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 TAS2R14Q9NYV8 317 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 TINAGQ9UJW2 476 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 FBXL2Q9UKC9 423 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 NFS1Q9Y697 457 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 SCN5AQ14524 2016 aa3.93□□□□□ -1.78
SQLE-204ENST00000520493 OOEPA6NGQ2 149 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 SRRM3A6NNA2 597 aaPredicted RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 SLC30A4O14863 429 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 BUD23O43709 281 aaKnown RBP3.92□□□□□ -1.78
SQLE-204ENST00000520493 SSX4O60224 188 aa3.92□□□□□ -1.78
SQLE-204ENST00000520493 MED24O75448 989 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms