RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 LPOP22079 712 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-202ENST00000517403 AKT1P31749 480 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 FOXN2P32314 431 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 CASRP41180 1078 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 PTGIRP43119 386 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 CD97P48960 835 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 LMAN1P49257 510 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 MLLT10P55197 1068 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 SNRPNP63162 240 aaKnown RBP8.4□□□□□ -1.06
PABPC1-202ENST00000517403 XRCC4Q13426 336 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 SIX1Q15475 284 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-202ENST00000517403 DEFB110Q30KQ9 67 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 PTCHD3Q3KNS1 767 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.4□□□□□ -1.06
PABPC1-202ENST00000517403 CCDC38Q502W7 563 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 LDLRAP1Q5SW96 308 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 RASGRP3Q8IV61 690 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 VRK3Q8IV63 474 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 ADGRF3Q8IZF5 1079 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 ESX1Q8N693 406 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 FAM71DQ8N9W8 422 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 CCDC112Q8NEF3 446 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 OR13J1Q8NGT2 312 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 OR1L3Q8NH93 324 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 LINC00615Q96LM1 132 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-202ENST00000517403 TBL1YQ9BQ87 522 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 TMEM121Q9BTD3 319 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 HGH1Q9BTY7 390 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 FSD1LQ9BXM9 530 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 TRIM5Q9C035 493 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 SAP130Q9H0E3 1048 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 ADNPQ9H2P0 1102 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 EPB41L1Q9H4G0 881 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 TRABDQ9H4I3 376 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 ASB8Q9H765 288 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 COG4Q9H9E3 785 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 SPHK1Q9NYA1 384 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.4□□□□□ -1.061e-26■■■■■ 29.5
PABPC1-202ENST00000517403 LUZP4Q9P127 313 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 CIDEBQ9UHD4 219 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 TLK1Q9UKI8 766 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 PLAGL1Q9UM63 463 aa8.4□□□□□ -1.06
PABPC1-202ENST00000517403 TLCD2A6NGC4 264 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 SLC9B1P1A6NJY1 282 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 STX7O15400 261 aaKnown RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 TOX3O15405 576 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 NDUFB5O43674 189 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 OR1I1O60431 355 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 KATNA1O75449 491 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 CREG1O75629 220 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 MED26O95402 600 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 TCN2P20062 427 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 PSMA3P25788 255 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 MC4RP32245 332 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 CCR10P46092 362 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 VAV2P52735 878 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 PMS2P54278 862 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 GEMP55040 296 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 KCNC4Q03721 635 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 GRB7Q14451 532 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 POU6F1Q14863 301 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 NADK2Q4G0N4 442 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 TBCELQ5QJ74 424 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 DNTTIP2Q5QJE6 756 aaKnown RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 PLEKHS1Q5SXH7 462 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 CDHR3Q6ZTQ4 885 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 ZNF534Q76KX8 674 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 LDB1Q86U70 411 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 SERPINA9Q86WD7 417 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 Q8NA96 180 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 ZNF511Q8NB15 262 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 OR4E2Q8NGC2 313 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 OR52E1Q8NGJ3 308 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 OR5AR1Q8NGP9 310 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 UBXN4Q92575 508 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 MIB2Q96AX9 1013 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 ZNF514Q96K75 400 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 HS3ST6Q96QI5 342 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 VAT1Q99536 393 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 TRIM56Q9BRZ2 755 aaKnown RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 MENTQ9BUN1 341 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 PITPNM3Q9BZ71 974 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 CHST8Q9H2A9 424 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 STN1Q9H668 368 aaKnown RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 ARNT2Q9HBZ2 717 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 RAD18Q9NS91 495 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 PCMTD2Q9NV79 361 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 HACD3Q9P035 362 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 MARCH4Q9P2E8 410 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 TUBD1Q9UJT1 453 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 TRHDEQ9UKU6 1024 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 CDYLQ9Y232 598 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 BTRCQ9Y297 605 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 KLHL20Q9Y2M5 609 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 PCDHGA6Q9Y5G7 932 aa8.39□□□□□ -1.07
PABPC1-202ENST00000517403 HEMK1Q9Y5R4 338 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 EPN1Q9Y6I3 576 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-202ENST00000517403 FLNCQ14315 2725 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 SPTA1P02549 2419 aa8.38□□□□□ -1.07
PABPC1-202ENST00000517403 CCDC162PA2VCL2 907 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms