RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CYP1B1Q16678 543 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TPD52L1Q16890 204 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 RNF151Q2KHN1 245 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SOWAHAQ2M3V2 549 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 KRT71Q3SY84 523 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SGO1Q5FBB7 561 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 C9orf50Q5SZB4 431 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TSTD2Q5T7W7 516 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM102AQ5T9C2 384 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 PRAMEF7Q5VXH5 474 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 NCR3LG1Q68D85 454 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC23A3Q6PIS1 610 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 FIGLAQ6QHK4 219 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 DLEU7Q6UYE1 221 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TRILQ7L0X0 811 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CENPQQ7L2Z9 268 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 NRARPQ7Z6K4 114 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 IGFN1Q86VF2 1251 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 KLBQ86Z14 1044 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM126BQ8IUX1 230 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 GRAMD2AQ8IUY3 354 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SRRM1Q8IYB3 904 aaKnown RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 KLHDC8AQ8IYD2 350 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SVOPQ8N4V2 548 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZBTB2Q8N680 514 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 RNF148Q8N7C7 305 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 LINC00482Q8N8I6 264 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CCDC63Q8NA47 563 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 GJC3Q8NFK1 279 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR52N2Q8NGI0 321 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 OR8J1Q8NGP2 316 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM170AQ8WVE7 144 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 LPIN2Q92539 896 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SYN2Q92777 582 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ATOH1Q92858 354 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 IRF7Q92985 503 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 DHX58Q96C10 678 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 THOC3Q96J01 351 aaKnown RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 AGAP3Q96P47 875 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SNX18Q96RF0 628 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 USP28Q96RU2 1077 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 CRAMP1Q96RY5 1269 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SMC6Q96SB8 1091 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 PCGF1Q9BSM1 259 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ADGRE3Q9BY15 652 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 THAP2Q9H0W7 228 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SNX25Q9H3E2 840 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 TMEM231Q9H6L2 316 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ROPN1Q9HAT0 212 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 RAB9BQ9NP90 201 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 KLHL8Q9P2G9 620 aaPredicted RBP3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 MALT1Q9UDY8 824 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 AMFRQ9UKV5 643 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 GPR132Q9UNW8 380 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ENTPD4Q9Y227 616 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 AP4B1Q9Y6B7 739 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 SLC4A4Q9Y6R1 1079 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF541Q9H0D2 1346 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 PTCH1Q13635 1447 aa3.86□□□□□ -1.79
RNU4-60P-201ENST00000517239 A0A075B6Q4 140 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PMS2P1A4D2B8 440 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 FAM90A10PA6NDY2 464 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 DUXAA6NLW8 204 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 E9PI62 339 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 H0YIG0 161 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 HRKO00198 91 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 LEFTY2O00292 366 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 VCYO14598 125 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CETN3O15182 167 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 NVLO15381 856 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 RNF113AO15541 343 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 DCXO43602 365 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 FOXD2O60548 495 aaPredicted RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 TSPAN1O60635 241 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 MFAP3LO75121 409 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 GMNNO75496 209 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 LUC7L3O95232 432 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 MED26O95402 600 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CYP1A1P04798 512 aaPredicted RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CYP1A2P05177 515 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 RAB40ALP0C0E4 278 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 IQCF3P0C7M6 154 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 DANCRP0C864 163 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 MYZAPP0CAP1 466 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 KRT3P12035 628 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ZNF28P17035 718 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 TNNI3P19429 210 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 CD22P20273 847 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 TGM2P21980 687 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PAICSP22234 425 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 HLA-FP30511 346 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 RYKP34925 604 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 MMP13P45452 471 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 ASCL1P50553 236 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 HNRNPMP52272 730 aaKnown RBP eCLIP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 HUNKP57058 714 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 EIF3EP60228 445 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 WDR5P61964 334 aaKnown RBP3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 PSG6Q00889 435 aa3.85□□□□□ -1.79
RNU4-60P-201ENST00000517239 RHAGQ02094 409 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms