RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 RAD23BP54727 409 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 CDH15P55291 814 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 NDUFV3P56181 108 aaKnown RBP-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 TNFRSF9Q07011 255 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 IL17AQ16552 155 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 GSG1Q2KHT4 349 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 C2orf68Q2NKX9 166 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 NHLRC3Q5JS37 347 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 NDUFAF5Q5TEU4 345 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 RNF219Q5W0B1 726 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 LCLAT1Q6UWP7 414 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 RNF44Q7L0R7 432 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 CATSPER3Q86XQ3 398 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 SPATA6LQ8N4H0 392 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 HPS3Q969F9 1004 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 ZNF570Q96NI8 536 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 NECTIN4Q96NY8 510 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 STACQ99469 402 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 SH3GL2Q99962 352 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 SMYD2Q9NRG4 433 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 TMEM9Q9P0T7 183 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 DHRS4-AS1Q9P1J3 65 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 FBXL2Q9UKC9 423 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 TTC7AQ9ULT0 858 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 FER1L5A0AVI2 2057 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 SPATA31D1Q6ZQQ2 1576 aa-1.21□□□□□ -2.6
RNU6-539P-201ENST00000516665 GABRDO14764 452 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 ADAP00813 363 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 PRH1P02810 166 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 HLA-FP30511 346 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 FASLGP48023 281 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 CCR5P51681 352 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 IST1P53990 364 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 FKBP3Q00688 224 aaKnown RBP-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 FOXD4Q12950 439 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 MFAP5Q13361 173 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 ITGA7Q13683 1181 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 SIX1Q15475 284 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 AP5B1Q2VPB7 878 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 RABL6Q3YEC7 729 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 SGO1Q5FBB7 561 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 FAM102BQ5T8I3 360 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 APOA5Q6Q788 366 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 PLPPR4Q7Z2D5 763 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 ZNF695Q8IW36 515 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 KIRREL3Q8IZU9 778 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 SDR16C5Q8N3Y7 309 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 SPPL3Q8TCT6 385 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 GATAD1Q8WUU5 269 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 HSD17B8Q92506 261 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 C1GALT1C1Q96EU7 318 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 LRRC46Q96FV0 321 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 EIF2AK1Q9BQI3 630 aaKnown RBP-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 PITPNM3Q9BZ71 974 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 OCR1Q9BZK8 76 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 SLC32A1Q9H598 525 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 KIF17Q9P2E2 1029 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 IFT80Q9P2H3 777 aaPredicted RBP-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 RCE1Q9Y256 329 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 PCM1Q15154 2024 aa-1.22□□□□□ -2.6
RNU6-539P-201ENST00000516665 PHLDB1Q86UU1 1377 aa-1.22□□□□□ -2.61
RNU6-539P-201ENST00000516665 A0A1B0GW55 424 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 SPINT2O43291 252 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 SCO2O43819 266 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 SRPX2O60687 465 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 MT-ND1P03886 318 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DANCRP0C864 163 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DUX4L2P0CJ85 424 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DUX4L3P0CJ86 424 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DUX4L5P0CJ88 424 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DUX4L6P0CJ89 424 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DUX4L7P0CJ90 424 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 ETFAP13804 333 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 ATP2B1P20020 1258 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 EFNA1P20827 205 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 HSPA4P34932 840 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 GJC1P36383 396 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 GPM6AP51674 278 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 RPS6KA3P51812 740 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 NR1H2P55055 460 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 CSNK2A1P68400 391 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 NAAAQ02083 359 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 FOXM1Q08050 763 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 RUNX2Q13950 521 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 CYLC2Q14093 348 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF267Q14586 743 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 IL13RA2Q14627 380 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 SS18Q15532 418 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DECR1Q16698 335 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 USP41Q3LFD5 358 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 ZNF667Q5HYK9 610 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 CYB5R2Q6BCY4 276 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 LRRC8EQ6NSJ5 796 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 DUX4L9Q6RFH8 374 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 BBS12Q6ZW61 710 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 CHD1LQ86WJ1 897 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 TTC30AQ86WT1 665 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 PTOV1Q86YD1 416 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 CRYBG2Q8N1P7 616 aa-1.23□□□□□ -2.61
RNU6-539P-201ENST00000516665 CSNK2A3Q8NEV1 391 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms