RNA–Protein interactions for RNA: ENST00000516307.1

RNU4ATAC4P-201, Transcript of RNA, U4atac small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4ATAC4P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC4P-201ENST00000516307 FOXD4Q12950 439 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 EIF4EBP1Q13541 118 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 HLTFQ14527 1009 aaKnown RBP eCLIP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 NR1D2Q14995 579 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 HIST2H2ACQ16777 129 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 TIMM50Q3ZCQ8 353 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SPECC1Q5M775 1068 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 C9orf129Q5T035 196 aaKnown RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 KLC3Q6P597 504 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SLC25A47Q6Q0C1 308 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CORO6Q6QEF8 472 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 LCLAT1Q6UWP7 414 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 RRAGAQ7L523 313 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SYT13Q7L8C5 426 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 TADA2BQ86TJ2 420 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 OAFQ86UD1 273 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 RNF130Q86XS8 419 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 TDRPQ86YL5 185 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 HIPK1Q86Z02 1210 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SLC44A2Q8IWA5 706 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CCDC117Q8IWD4 279 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 PM20D2Q8IYS1 436 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 KIRREL3Q8IZU9 778 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SLC5A8Q8N695 610 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 C1orf52Q8N6N3 182 aaKnown RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 C4orf32Q8N8J7 132 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 L3MBTL4Q8NA19 623 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 USP38Q8NB14 1042 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 PCYOX1LQ8NBM8 494 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 GPRC5AQ8NFJ5 357 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 LINS1Q8NG48 757 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 OR2L5Q8NG80 312 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 OR1J1Q8NGS3 322 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SCAMP5Q8TAC9 235 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 STYXQ8WUJ0 223 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SRSF12Q8WXF0 261 aaKnown RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CNOT9Q92600 299 aaKnown RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 NSMAFQ92636 917 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 FRAT1Q92837 279 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SH3KBP1Q96B97 665 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 KTI12Q96EK9 354 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CNRIP1Q96F85 164 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 MPP4Q96JB8 637 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 NECTIN4Q96NY8 510 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 MYADMQ96S97 322 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ZNF184Q99676 751 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 OVOL2Q9BRP0 275 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CCDC28BQ9BUN5 200 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 MAK16Q9BXY0 300 aaKnown RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 DEFB126Q9BYW3 111 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 IFIH1Q9BYX4 1025 aaKnown RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SLC25A39Q9BZJ4 359 aaPredicted RBP-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 LMAN2LQ9H0V9 348 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CDH19Q9H159 772 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 IKZF5Q9H5V7 419 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 EPHX3Q9H6B9 360 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ACKR4Q9NPB9 350 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 VNN3Q9NY84 501 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 KIAA1456Q9P272 454 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 EID1Q9Y6B2 187 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CEPT1Q9Y6K0 416 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 MYO16Q9Y6X6 1858 aa-0.01□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 KMT2BQ9UMN6 2715 aaPredicted RBP-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 PHGR1C9JFL3 82 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 STX16-NPEPL1H3BU86 382 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 M0QZ24 198 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 NCK2O43639 380 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ZNF861PO60384 105 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 AVILO75366 819 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ZNF324O75467 553 aaPredicted RBP-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ALDH1L1O75891 902 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 KRT38O76015 456 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ACTL6BO94805 426 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SEC24AO95486 1093 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ACTL6AO96019 429 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 IGLV1-47P01700 117 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 TFP02787 698 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 VTNP04004 478 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 H1F0P07305 194 aaKnown RBP-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ATF3P18847 181 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 TNFAIP3P21580 790 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CA4P22748 312 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 POU1F1P28069 291 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 HOXC9P31274 260 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 PTGDSP41222 190 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 HSPA7P48741 367 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 RPL34P49207 117 aaKnown RBP-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 CD81P60033 236 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ERVPABLB-1P60509 514 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 PFN3P60673 137 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 BTKQ06187 659 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ZNF177Q13360 481 aaPredicted RBP-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 GRM3Q14832 879 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ZNF146Q15072 292 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 PPP2R5BQ15173 497 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 SMAD1Q15797 465 aaKnown RBP-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 LY6EQ16553 131 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 ISXQ2M1V0 245 aa-0.02□□□□□ -2.41
RNU4ATAC4P-201ENST00000516307 USP41Q3LFD5 358 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms