RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 OR4C6Q8NH72 309 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 ZDHHC1Q8WTX9 485 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 ANKRD49Q8WVL7 239 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 DERL2Q9GZP9 239 aa20.51■□□□□ 0.87
LSM6-207ENST00000515311 ZFHX2Q9C0A1 2572 aaPredicted RBP20.51■□□□□ 0.87
LSM6-207ENST00000515311 FFAR2O15552 330 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 MATN4O95460 622 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 CCDC166P0CW27 439 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 COL6A2P12110 1019 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 CLCA4Q14CN2 919 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 INAVAQ3KP66 663 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 PPM1JQ5JR12 505 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 UNC5DQ6UXZ4 953 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 DBX2Q6ZNG2 339 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 PIWIL4Q7Z3Z4 852 aaKnown RBP20.5■□□□□ 0.87
LSM6-207ENST00000515311 TRABD2AQ86V40 505 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 LCA5Q86VQ0 697 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 SPDYE1Q8NFV5 336 aaPredicted RBP20.5■□□□□ 0.87
LSM6-207ENST00000515311 STMN4Q9H169 189 aaPredicted RBP20.5■□□□□ 0.87
LSM6-207ENST00000515311 HEBP2Q9Y5Z4 205 aa20.5■□□□□ 0.87
LSM6-207ENST00000515311 EP300Q09472 2414 aaPredicted RBP20.5■□□□□ 0.87
LSM6-207ENST00000515311 ARID1BQ8NFD5 2236 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 A0A1W2PPM1 405 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 B4DGG1 531 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 AGPSO00116 658 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 MTHFD1P11586 935 aaKnown RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 ATP6V0D1P61421 351 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 RPE65Q16518 533 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 AASDHQ4L235 1098 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 TNFAIP8L3Q5GJ75 292 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 ZCCHC8Q6NZY4 707 aaKnown RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 CYHR1Q6ZMK1 362 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 C17orf82Q86X59 251 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 RASGRP3Q8IV61 690 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 SPNS2Q8IVW8 549 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 CENPLQ8N0S6 344 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 NAGSQ8N159 534 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 SFRP1Q8N474 314 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 AVL9Q8NBF6 648 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 SKA2Q8WVK7 121 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 TFGQ92734 400 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 C12orf66Q96MD2 445 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 FOPNLQ96NB1 174 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 INSM2Q96T92 566 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 VPS11Q9H270 941 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 ACBD3Q9H3P7 528 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 RXFP3Q9NSD7 469 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 SENP1Q9P0U3 644 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 SCHIP1Q9P0W5 487 aaPredicted RBP20.49■□□□□ 0.87
LSM6-207ENST00000515311 RAPGEFL1Q9UHV5 662 aa20.49■□□□□ 0.87
LSM6-207ENST00000515311 COL5A1P20908 1838 aaPredicted RBP20.48■□□□□ 0.87
LSM6-207ENST00000515311 FLRT2O43155 660 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 NOBOXO60393 691 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 SASH3O75995 380 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 RPN2P04844 631 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 LTA4HP09960 611 aaKnown RBP20.48■□□□□ 0.87
LSM6-207ENST00000515311 PYGBP11216 843 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 XRCC1P18887 633 aaPredicted RBP20.48■□□□□ 0.87
LSM6-207ENST00000515311 CCNFP41002 786 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 GRK6P43250 576 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 SP140Q13342 867 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 FAM83EQ2M2I3 478 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 SH2D5Q6ZV89 423 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 CLEC14AQ86T13 490 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 ARL10Q8N8L6 244 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 FAM181AQ8N9Y4 354 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 GPR156Q8NFN8 814 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 ASB11Q8WXH4 323 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 CENPHQ9H3R5 247 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 NMRAL1Q9HBL8 299 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 IGSF5Q9NSI5 407 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 PCMTD2Q9NV79 361 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 NCKIPSDQ9NZQ3 722 aa20.48■□□□□ 0.87
LSM6-207ENST00000515311 ZNF624Q9P2J8 865 aaPredicted RBP20.48■□□□□ 0.87
LSM6-207ENST00000515311 CCDC189A1A4V9 331 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 OR52A4PA6NMU1 304 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 FOXO6A8MYZ6 492 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 GFYI3L273 518 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 TRIM38O00635 465 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 ATP8B1O43520 1251 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 PSIP1O75475 530 aaKnown RBP20.47■□□□□ 0.87
LSM6-207ENST00000515311 KLHL2O95198 593 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 C8GP07360 202 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 KRT4P19013 534 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 NDUFS1P28331 727 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 IRF9Q00978 393 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 ABRQ12979 859 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 CSHL1Q14406 222 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 TSNAXIP1Q2TAA8 658 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 MAPK15Q8TD08 544 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 SLC37A2Q8TED4 501 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 KCTD4Q8WVF5 259 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 CXorf40BQ96DE9 158 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 SH3GL2Q99962 352 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 MVB12BQ9H7P6 319 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 TMBIM4Q9HC24 238 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 POT1Q9NUX5 634 aa20.47■□□□□ 0.87
LSM6-207ENST00000515311 IMP3Q9NV31 184 aaKnown RBP20.47■□□□□ 0.87
LSM6-207ENST00000515311 TSR3Q9UJK0 312 aaKnown RBP20.47■□□□□ 0.87
LSM6-207ENST00000515311 ASF1AQ9Y294 204 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms