RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 EIF3HO15372 352 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP46-209ENST00000514536 NDUFS1P28331 727 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 ABRQ12979 859 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 PRKG2Q13237 762 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 RTP5Q14D33 572 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 PLCL1Q15111 1095 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 TMED2Q15363 201 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 C3orf38Q5JPI3 329 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 SNAP47Q5SQN1 464 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 ZNF549Q6P9A3 640 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 WDR74Q6RFH5 385 aaPredicted RBP13.6□□□□□ -0.23
USP46-209ENST00000514536 OTOAQ7RTW8 1153 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 CCDC25Q86WR0 208 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 PALM2Q8IXS6 379 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 SLC22A15Q8IZD6 547 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 C2CD4AQ8NCU7 369 aaPredicted RBP13.6□□□□□ -0.23
USP46-209ENST00000514536 GABPB2Q8TAK5 448 aaPredicted RBP13.6□□□□□ -0.23
USP46-209ENST00000514536 PYROXD1Q8WU10 500 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 LIN37Q96GY3 246 aaPredicted RBP13.6□□□□□ -0.23
USP46-209ENST00000514536 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 CCDC68Q9H2F9 335 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 KIR3DX1Q9H7L2 352 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 GALPQ9UBC7 116 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 KLHL3Q9UH77 587 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 DMGDHQ9UI17 866 aaKnown RBP13.6□□□□□ -0.23
USP46-209ENST00000514536 SATB2Q9UPW6 733 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 ASF1AQ9Y294 204 aa13.6□□□□□ -0.23
USP46-209ENST00000514536 CCDC187A0A096LP49 1063 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 PMS2P1A4D2B8 440 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 A8MU76 341 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 E5RI56 91 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 KPNA5O15131 536 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 SLCO2B1O94956 709 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 LEPRP48357 1165 aaKnown RBP13.59□□□□□ -0.23
USP46-209ENST00000514536 GABREP78334 506 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 GLE1Q53GS7 698 aaKnown RBP13.59□□□□□ -0.23
USP46-209ENST00000514536 TEDDM1Q5T9Z0 273 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 CAPN12Q6ZSI9 719 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 RAB11FIP2Q7L804 512 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 PLXDC1Q8IUK5 500 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 RCBTB1Q8NDN9 531 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 ACVR1CQ8NER5 493 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 OR4E2Q8NGC2 313 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 OR5AR1Q8NGP9 310 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 CFAP61Q8NHU2 1237 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 WDR36Q8NI36 951 aaKnown RBP13.59□□□□□ -0.23
USP46-209ENST00000514536 MDM1Q8TC05 714 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 SEC14L1Q92503 715 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 RSC1A1Q92681 617 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 NXPE2Q96DL1 559 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 CCDC86Q9H6F5 360 aaKnown RBP13.59□□□□□ -0.23
USP46-209ENST00000514536 MVB12BQ9H7P6 319 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 POLR1BQ9H9Y6 1135 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 PDP2Q9P2J9 529 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 SLC17A6Q9P2U8 582 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 SPEGQ15772 3267 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 ASPMQ8IZT6 3477 aa13.59□□□□□ -0.23
USP46-209ENST00000514536 CAPN5O15484 640 aaPredicted RBP13.58□□□□□ -0.23
USP46-209ENST00000514536 AHSGP02765 367 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 THRAP10827 490 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 GABRB3P28472 473 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 SSTR1P30872 391 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 LSSP48449 732 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 GFERP55789 205 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 MGAT5Q09328 741 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.23
USP46-209ENST00000514536 FRG1Q14331 258 aaKnown RBP13.58□□□□□ -0.23
USP46-209ENST00000514536 C16orf72Q14CZ0 275 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 PLEKHS1Q5SXH7 462 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 CNTN4Q8IWV2 1026 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 FBXO39Q8N4B4 442 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 GSDMBQ8TAX9 411 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 C9orf72Q96LT7 481 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 TGM7Q96PF1 710 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 NRTNQ99748 197 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 HGH1Q9BTY7 390 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 LATS2Q9NRM7 1088 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 MOCS1Q9NZB8 636 aa13.58□□□□□ -0.23
USP46-209ENST00000514536 PIKFYVEQ9Y2I7 2098 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 OR6C74A6NCV1 312 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 BRINP1O60477 761 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 HGFP14210 728 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 ABCG1P45844 678 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 CAPZBP47756 277 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 IRGCQ6NXR0 463 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 KLHL35Q6PF15 583 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 KIAA0408Q6ZU52 694 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 SPNS2Q8IVW8 549 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 TBC1D21Q8IYX1 336 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 ZBTB2Q8N680 514 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 KDF1Q8NAX2 398 aaPredicted RBP13.58□□□□□ -0.24
USP46-209ENST00000514536 OR52E1Q8NGJ3 308 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 SKA2Q8WVK7 121 aaPredicted RBP13.58□□□□□ -0.24
USP46-209ENST00000514536 LCN9Q8WX39 176 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 IFT81Q8WYA0 676 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 PRR11Q96HE9 360 aaPredicted RBP13.58□□□□□ -0.24
USP46-209ENST00000514536 CMKLR1Q99788 373 aa13.58□□□□□ -0.24
USP46-209ENST00000514536 AARSD1Q9BTE6 412 aaKnown RBP13.58□□□□□ -0.24
USP46-209ENST00000514536 TRIT1Q9H3H1 467 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms