RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 AHCYL2Q96HN2 611 aaKnown RBP12.95□□□□□ -0.34
TCOF1-213ENST00000514442 AASDHPPTQ9NRN7 309 aa12.95□□□□□ -0.34
TCOF1-213ENST00000514442 TLL2Q9Y6L7 1015 aa12.95□□□□□ -0.34
TCOF1-213ENST00000514442 A0A1W2PQ45 241 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-213ENST00000514442 A0A1W2PQY0 241 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 NUAK1O60285 661 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 CPNE3O75131 537 aaKnown RBP12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PRKAR1AP10644 381 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 MYF6P23409 242 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PRKCHP24723 683 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 IL10RBQ08334 325 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 CEACAM7Q14002 265 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 DAG1Q14118 895 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PSRC1Q6PGN9 363 aaPredicted RBP12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PLET1Q6UQ28 207 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PRR23BQ6ZRT6 265 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ARNTL2Q8WYA1 636 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 TOR3AQ9H497 397 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ANKMY1Q9P2S6 941 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ARL5AQ9Y689 179 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 EPORP19235 508 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 GCAP28676 217 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 SCN1BQ07699 218 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ZNF181Q2M3W8 571 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 SVOPLQ8N434 492 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PLD4Q96BZ4 506 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 FERD3LQ96RJ6 166 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 SMOQ99835 787 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ENTPD4Q9Y227 616 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 OR51F1A6NGY5 319 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 CLIC3O95833 236 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 SLC35G4P0C7Q5 338 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 SYN1P17600 705 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 TALDO1P37837 337 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 SPAM1P38567 509 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ETV4P43268 484 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 OLIG2Q13516 323 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ANKDD1AQ495B1 522 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 FAM131AQ6UXB0 335 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ANKFN1Q8N957 763 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 TMEM246Q9BRR3 403 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 DUS2Q9NX74 493 aaKnown RBP12.94□□□□□ -0.34
TCOF1-213ENST00000514442 KLHL28Q9NXS3 571 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ZNF222Q9UK12 451 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 IKZF3Q9UKT9 509 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 NENFQ9UMX5 172 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 VPS4AQ9UN37 437 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 TLR6Q9Y2C9 796 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 E7ESA3 106 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PRKCGP05129 697 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 HLA-DQB2P05538 268 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 HLCSP50747 726 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 C19orf60Q96EN9 201 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 PIWIL1Q96J94 861 aaKnown RBP12.94□□□□□ -0.34
TCOF1-213ENST00000514442 FEM1CQ96JP0 617 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 REEP1Q9H902 201 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 ABCB8Q9NUT2 735 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 IMP3Q9NV31 184 aaKnown RBP12.94□□□□□ -0.34
TCOF1-213ENST00000514442 CCDC88AQ3V6T2 1871 aa12.94□□□□□ -0.34
TCOF1-213ENST00000514442 NPHS1O60500 1241 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 PTPN2P17706 415 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 PROZP22891 400 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 TIE1P35590 1138 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 NOVP48745 357 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 KCNQ1P51787 676 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 OLR1P78380 273 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 NRG1Q02297 640 aaPredicted RBP12.93□□□□□ -0.34
TCOF1-213ENST00000514442 PIGGQ5H8A4 983 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 KRT78Q8N1N4 520 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 SCML4Q8N228 414 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
TCOF1-213ENST00000514442 TRIB2Q92519 343 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 TRMOQ9BU70 441 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 OXSMQ9NWU1 459 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 ISM1B1AKI9 464 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 C9JVG2 144 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 ENPP3O14638 875 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 ATE1O95260 518 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 DNTTP04053 509 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 C7P10643 843 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 CCL5P13501 91 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 NCK1P16333 377 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 CAPZA2P47755 286 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 CACNG1Q06432 222 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 C5orf22Q49AR2 442 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 FBXL22Q6P050 247 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 SYCE2Q6PIF2 218 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 ZNF517Q6ZMY9 492 aaPredicted RBP12.93□□□□□ -0.34
TCOF1-213ENST00000514442 DNAJB7Q7Z6W7 309 aaPredicted RBP12.93□□□□□ -0.34
TCOF1-213ENST00000514442 NACC2Q96BF6 587 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 CPNE5Q9HCH3 593 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 YIPF1Q9Y548 306 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 FGF19O95750 216 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 C8BP07358 591 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 CSKP41240 450 aa12.93□□□□□ -0.34
TCOF1-213ENST00000514442 PRMT2P55345 433 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms