RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 FAM45BPQ6NSW5 357 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 OTOAQ7RTW8 1153 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 ZNF547Q8IVP9 402 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 SPACA3Q8IXA5 215 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 SLC35F3Q8IY50 421 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 FAM46DQ8NEK8 389 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 FAM45AQ8TCE6 357 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 ELMO1Q92556 727 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 KCNJ9Q92806 393 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 TMEM159Q96B96 161 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 VPS39Q96JC1 886 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 TXLNGYQ9BZA5 131 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 RHOJQ9H4E5 214 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 STN1Q9H668 368 aaKnown RBP19.74■□□□□ 0.75
USP53-208ENST00000514305 SYNDIG1Q9H7V2 258 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 THSD1Q9NS62 852 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 ARGLU1Q9NWB6 273 aaPredicted RBP19.74■□□□□ 0.75
USP53-208ENST00000514305 TAS2R13Q9NYV9 303 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 RABGEF1Q9UJ41 708 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 PNMA8BQ9ULN7 279 aaPredicted RBP19.74■□□□□ 0.75
USP53-208ENST00000514305 PRKAB1Q9Y478 270 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 INHBAP08476 426 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 PBLDP30039 288 aaPredicted RBP19.73■□□□□ 0.75
USP53-208ENST00000514305 MSH2P43246 934 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 SERPINB9P50453 376 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 TLE3Q04726 772 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 PLA2G4EQ3MJ16 856 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 PERM1Q5SV97 790 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 CNSTQ6PJW8 725 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 CFAP206Q8IYR0 622 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 MYRIPQ8NFW9 859 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 AENQ8WTP8 325 aaKnown RBP19.73■□□□□ 0.75
USP53-208ENST00000514305 NAF1Q96HR8 494 aaKnown RBP19.73■□□□□ 0.75
USP53-208ENST00000514305 AARSD1Q9BTE6 412 aaKnown RBP19.73■□□□□ 0.75
USP53-208ENST00000514305 DPEP2Q9H4A9 486 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 PADI4Q9UM07 663 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 SATB2Q9UPW6 733 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 KCNK6Q9Y257 313 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 DNAJC16Q9Y2G8 782 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 BPTFQ12830 3046 aa19.73■□□□□ 0.75
USP53-208ENST00000514305 EXOC1LA0A1B0GW35 172 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 CCDC151A5D8V7 595 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 IFRD1O00458 451 aaPredicted RBP19.72■□□□□ 0.75
USP53-208ENST00000514305 CD9P21926 228 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 CNTFP26441 200 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 RBMS1P29558 406 aaKnown RBP19.72■□□□□ 0.75
USP53-208ENST00000514305 BIRC2Q13490 618 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 SPIDRQ14159 915 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 SLC29A2Q14542 456 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 PLEKHS1Q5SXH7 462 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 METRNLQ641Q3 311 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 SLC30A9Q6PML9 568 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 WASH2PQ6VEQ5 465 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 GPR155Q7Z3F1 870 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 C11orf96Q7Z7L8 435 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 ARL10Q8N8L6 244 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 OR6C4Q8NGE1 309 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 TSPAN17Q96FV3 270 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 ATXN7L3BQ96GX2 97 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 BIRC8Q96P09 236 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 CCDC3Q9BQI4 270 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 WASH6PQ9NQA3 447 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 LATS2Q9NRM7 1088 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 TAAR2Q9P1P5 351 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 GULP1Q9UBP9 304 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 FETUBQ9UGM5 382 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 VWA7Q9Y334 891 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 PRSS21Q9Y6M0 314 aa19.72■□□□□ 0.75
USP53-208ENST00000514305 PTPRQQ9UMZ3 2332 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 TEX51A0A1B0GUA7 166 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 PDZK1P1A8MUH7 402 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 ZW10O43264 779 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 SGTAO43765 313 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 AK4P27144 223 aaPredicted RBP19.71■□□□□ 0.75
USP53-208ENST00000514305 MAPK9P45984 424 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 UCNP55089 124 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 CXADRP78310 365 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 TCEA2Q15560 299 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 AGAP9Q5VTM2 703 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 LRRC8EQ6NSJ5 796 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 GPATCH11Q8N954 259 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 ZDHHC1Q8WTX9 485 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 KCNE4Q8WWG9 221 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 RBBP8Q99708 897 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 SIRPGQ9P1W8 387 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 TRMT6Q9UJA5 497 aaKnown RBP19.71■□□□□ 0.75
USP53-208ENST00000514305 ENTPD2Q9Y5L3 495 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 HEBP2Q9Y5Z4 205 aa19.71■□□□□ 0.75
USP53-208ENST00000514305 SMG1Q96Q15 3661 aaKnown RBP19.71■□□□□ 0.75
USP53-208ENST00000514305 FASNP49327 2511 aaKnown RBP19.71■□□□□ 0.75
USP53-208ENST00000514305 KIR2DS5A0A0G2JLQ3 304 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 A0A0G2JNG1 304 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 KIR2DS3K7RE56 304 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 CTIFO43310 598 aaKnown RBP19.7■□□□□ 0.74
USP53-208ENST00000514305 SNX2O60749 519 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 KRT38O76015 456 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 CELA2BP08218 269 aaPredicted RBP19.7■□□□□ 0.74
USP53-208ENST00000514305 SLC35G4P0C7Q5 338 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 RGS4P49798 205 aa19.7■□□□□ 0.74
USP53-208ENST00000514305 TMPRSS3P57727 454 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms