RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 ACBD4Q8NC06 268 aa10.48□□□□□ -0.73
NFKB1-211ENST00000513803 ADAMTS18Q8TE60 1221 aa10.48□□□□□ -0.73
NFKB1-211ENST00000513803 LCN9Q8WX39 176 aa10.48□□□□□ -0.73
NFKB1-211ENST00000513803 MAML1Q92585 1016 aa10.48□□□□□ -0.73
NFKB1-211ENST00000513803 CSPG4P5Q96PW8 444 aa10.48□□□□□ -0.73
NFKB1-211ENST00000513803 FOXC2Q99958 501 aa10.48□□□□□ -0.73
NFKB1-211ENST00000513803 MRM3Q9HC36 420 aaKnown RBP10.48□□□□□ -0.73
NFKB1-211ENST00000513803 MAGEE1Q9HCI5 957 aa10.48□□□□□ -0.73
NFKB1-211ENST00000513803 FLNAP21333 2647 aaKnown RBP10.48□□□□□ -0.73
NFKB1-211ENST00000513803 STAB1Q9NY15 2570 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 KLHL33A6NCF5 533 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 SOCS6O14544 535 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 ALOX12BO75342 701 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 PMPCBO75439 489 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 RASAL1O95294 804 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 PIM1P11309 404 aaPredicted RBP10.47□□□□□ -0.73
NFKB1-211ENST00000513803 TNFSF10P50591 281 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 JAM2P57087 298 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 FOXL2P58012 376 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 CDSNQ15517 529 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 LONRF1Q17RB8 773 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 TUBB8Q3ZCM7 444 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 ATP13A5Q4VNC0 1218 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 LDLRAP1Q5SW96 308 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 CCDC122Q5T0U0 273 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 PPP1R2P3Q6NXS1 205 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 TLDC1Q6P9B6 456 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 TMEM220Q6QAJ8 160 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 KIRREL2Q6UWL6 708 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 HOOK3Q86VS8 718 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 RASGEF1AQ8N9B8 481 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 FATE1Q969F0 183 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 SRPK1Q96SB4 655 aaKnown RBP10.47□□□□□ -0.73
NFKB1-211ENST00000513803 AGPAT1Q99943 283 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 REPIN1Q9BWE0 567 aaKnown RBP10.47□□□□□ -0.73
NFKB1-211ENST00000513803 SPRTNQ9H040 489 aaPredicted RBP10.47□□□□□ -0.73
NFKB1-211ENST00000513803 WWP1Q9H0M0 922 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 GANQ9H2C0 597 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 CXXC4Q9H2H0 198 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 GSX1Q9H4S2 264 aaPredicted RBP10.47□□□□□ -0.73
NFKB1-211ENST00000513803 NLRC4Q9NPP4 1024 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 DHCR7Q9UBM7 475 aaKnown RBP10.47□□□□□ -0.73
NFKB1-211ENST00000513803 TMPRSS11EQ9UL52 423 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 HEBP2Q9Y5Z4 205 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
NFKB1-211ENST00000513803 NCOA6Q14686 2063 aaPredicted RBP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 MGAT4DA6NG13 374 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 TMEM191CA6NGB0 347 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 ZSCAN9O15535 394 aaPredicted RBP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 SLC4A1P02730 911 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 ALBP02768 609 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 SLC35G4P0C7Q5 338 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 CCNCP24863 283 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 MST1P26927 711 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 DNAJA1P31689 397 aaKnown RBP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 PCK1P35558 622 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 CD86P42081 329 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 IST1P53990 364 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 CAMK4Q16566 473 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 C3AR1Q16581 482 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 IFI16Q16666 785 aaKnown RBP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 ZNF655Q8N720 491 aaPredicted RBP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 MLKLQ8NB16 471 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 ACVR1CQ8NER5 493 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 CCDC110Q8TBZ0 833 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 HSPH1Q92598 858 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 HAS2Q92819 552 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 TREX2Q9BQ50 279 aaPredicted RBP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 KLHL25Q9H0H3 589 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 WDR54Q9H977 334 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 FANCLQ9NW38 375 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 IRAK4Q9NWZ3 460 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 TNFRSF10DQ9UBN6 386 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 MRPS2Q9Y399 296 aaKnown RBP10.46□□□□□ -0.73
NFKB1-211ENST00000513803 ZNF711Q9Y462 761 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 HS3ST3B1Q9Y662 390 aa10.46□□□□□ -0.73
NFKB1-211ENST00000513803 PCM1Q15154 2024 aa10.46□□□□□ -0.74
NFKB1-211ENST00000513803 RTTNQ86VV8 2226 aa10.46□□□□□ -0.74
NFKB1-211ENST00000513803 C17orf113A0A1B0GUU1 675 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 OR2AG2A6NM03 316 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 FOXO6A8MYZ6 492 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 C2orf74A8MZ97 194 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 H3BMH7 237 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 USP1O94782 785 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 PIRTP0C851 137 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 PYGMP11217 842 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 PVRP15151 417 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 ITGAXP20702 1163 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 ALAS2P22557 587 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 CTSCP53634 463 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 GALNT2Q10471 571 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 BECN1Q14457 450 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 RBBP7Q16576 425 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 SLC5A12Q1EHB4 618 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 LONRF2Q1L5Z9 754 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 HSP90AA4PQ58FG1 418 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 CCDC70Q6NSX1 233 aa10.45□□□□□ -0.74
NFKB1-211ENST00000513803 OVCH1Q7RTY7 1134 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms