RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 NOL11Q9H8H0 719 aaKnown RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 IPPKQ9H8X2 491 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 EFCAB1Q9HAE3 211 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 SDR39U1Q9NRG7 319 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 RIC8BQ9NVN3 520 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 WWOXQ9NZC7 414 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 OPTCQ9UBM4 332 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 MBD1Q9UIS9 605 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 SCML1Q9UN30 329 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 PDE10AQ9Y233 779 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ITM2BQ9Y287 266 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 ASB1Q9Y576 335 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
RNF4-220ENST00000513578 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
RNF4-220ENST00000513578 TTC28Q96AY4 2481 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 LOC100653049A0A140TA62 436 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 A0A1B0GTL3 188 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 BBIP1A8MTZ0 92 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 GPR89AB7ZAQ6 455 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 PSMD12O00232 456 aaPredicted RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 CHUKO15111 745 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 PEX11AO75192 247 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 KRT34O76011 436 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 OR4F21O95013 312 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 SNRPB2P08579 225 aaKnown RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 ALDOCP09972 364 aaKnown RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 GPR89BP0CG08 455 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 HGFP14210 728 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 IDO1P14902 403 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 GLULP15104 373 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 EPB42P16452 691 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 GPX3P22352 226 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 PRDX3P30048 256 aaKnown RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 DRD3P35462 400 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 GPR1P46091 355 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 PSMD8P48556 350 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 HSPA7P48741 367 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 CTSCP53634 463 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 STX1BP61266 288 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 MXRA7P84157 204 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 HSPA14Q0VDF9 509 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 CNTN1Q12860 1018 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 CUL3Q13618 768 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 FASTKQ14296 549 aaKnown RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 CST6Q15828 149 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 PDCD4Q53EL6 469 aaKnown RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 C2orf27AQ580R0 203 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 C6orf163Q5TEZ5 329 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 AGBL4Q5VU57 503 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 ZNF776Q68DI1 518 aaPredicted RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 MILR1Q7Z6M3 343 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 ADGRG6Q86SQ4 1221 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 RALGPS2Q86X27 583 aaPredicted RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 SNX32Q86XE0 403 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 VRK3Q8IV63 474 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 ULK2Q8IYT8 1036 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 PGAM4Q8N0Y7 254 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 POU5F2Q8N7G0 328 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 ZNF513Q8N8E2 541 aaPredicted RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 OR4F6Q8NGB9 312 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 OR2T3Q8NH03 318 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 MCOLN3Q8TDD5 553 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 ATL1Q8WXF7 558 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 ASB12Q8WXK4 309 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 EZH1Q92800 747 aaPredicted RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 DNASE1L2Q92874 299 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 MSANTD3Q96H12 275 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 PPP1R36Q96LQ0 422 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 KCNA7Q96RP8 456 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 EGFL8Q99944 293 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 THTPAQ9BU02 230 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 WRAP53Q9BUR4 548 aaKnown RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 SLC25A23Q9BV35 468 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 BRINP2Q9C0B6 783 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 C8orf33Q9H7E9 229 aaPredicted RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 DCLRE1BQ9H816 532 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 FBRSL1Q9HCM7 1045 aaKnown RBP8.19□□□□□ -1.1
RNF4-220ENST00000513578 CLDND1Q9NY35 253 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 ASIC5Q9NY37 505 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 CACNA2D2Q9NY47 1150 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 POLG2Q9UHN1 485 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 BAIAP2L1Q9UHR4 511 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 FIS1Q9Y3D6 152 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 GPR45Q9Y5Y3 372 aa8.19□□□□□ -1.1
RNF4-220ENST00000513578 DYTNA2CJ06 578 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 PABPN1LA6NDY0 278 aaKnown RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 GRXCR2A6NFK2 248 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 A8MUI8 341 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 SLC28A1O00337 649 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 UGDHO60701 494 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 MMP20O60882 483 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 CIB2O75838 187 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 GUCA1CO95843 209 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 CATP04040 527 aaKnown RBP8.18□□□□□ -1.1
RNF4-220ENST00000513578 CAPN1P07384 714 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 DRD1P21728 446 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 PRPH2P23942 346 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 NTSR1P30989 418 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 CTHP32929 405 aa8.18□□□□□ -1.1
RNF4-220ENST00000513578 GCKP35557 465 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms