RNA–Protein interactions for RNA: ENST00000513153.5

LINC01088-210, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 695 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-210ENST00000513153 RTN3O95197 1032 aaPredicted RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 DDX58O95786 925 aaKnown RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 NMBRP28336 390 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 CHRNA7P36544 502 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 PRAMEP78395 509 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 PRKCZQ05513 592 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 RIGQ13278 110 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 TSTQ16762 297 aaKnown RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 GLIPR1L2Q4G1C9 344 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 GKAP1Q5VSY0 366 aaPredicted RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 LINGO4Q6UY18 593 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 LRRTM1Q86UE6 522 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 ARID3BQ8IVW6 561 aaPredicted RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 LMNTD2Q8IXW0 634 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 MARVELD2Q8N4S9 558 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 RAB42Q8N4Z0 105 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 PDILTQ8N807 584 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 OR4C3Q8NH37 302 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 TBC1D16Q8TBP0 767 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 DYRK2Q92630 601 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 OMA1Q96E52 524 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 FAM81BQ96LP2 452 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 FOXN4Q96NZ1 517 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 SEC62Q99442 399 aaKnown RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 C1QTNF1Q9BXJ1 281 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 PLK3Q9H4B4 646 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 FAM120CQ9NX05 1096 aaKnown RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 TMEM98Q9Y2Y6 226 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 MOB4Q9Y3A3 225 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 CMAHPQ9Y471 501 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 RIPK3Q9Y572 518 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 PIAS3Q9Y6X2 628 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.15□□□□□ -1.91
LINC01088-210ENST00000513153 CROCCQ5TZA2 2017 aa3.15□□□□□ -1.91
LINC01088-210ENST00000513153 KPNA7A9QM74 516 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 E9PI62 339 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 HS6ST1O60243 411 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 GPIP06744 558 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 SRPRAP08240 638 aaKnown RBP3.14□□□□□ -1.91
LINC01088-210ENST00000513153 RARGP13631 454 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 PRG2P13727 222 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 UGT1A4P22310 534 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 CA4P22748 312 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 CAMPP49913 170 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 GSDMDP57764 484 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
LINC01088-210ENST00000513153 IKQ13123 557 aaPredicted RBP3.14□□□□□ -1.91
LINC01088-210ENST00000513153 DRP2Q13474 957 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 RAPSNQ13702 412 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 C2CD6Q53TS8 623 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 PAQR6Q6TCH4 344 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 TICAM1Q8IUC6 712 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 MAPKAPK5-AS1Q8N8E1 139 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 KBTBD8Q8NFY9 601 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 MTERF3Q96E29 417 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 GPATCH1Q9BRR8 931 aaKnown RBP3.14□□□□□ -1.91
LINC01088-210ENST00000513153 ATP13A3Q9H7F0 1226 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 DNAJC18Q9H819 358 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 A4GALTQ9NPC4 353 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 DIAPH3Q9NSV4 1193 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 PAG1Q9NWQ8 432 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 AMACRQ9UHK6 382 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 PCDHGA5Q9Y5G8 931 aa3.14□□□□□ -1.91
LINC01088-210ENST00000513153 PRSS51A0A1B0GVH4 220 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 TO15178 435 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 RNASEH2AO75792 299 aaKnown RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 NXPH2O95156 264 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 CA6P23280 308 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 HERV-K104P61576 105 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 ELAVL2Q12926 359 aaKnown RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 GRAPQ13588 217 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 NECTIN1Q15223 517 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 HLA-BQ31612 363 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 TAF1BQ53T94 588 aaPredicted RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 MDH1BQ5I0G3 518 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 WLSQ5T9L3 541 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 INTS11Q5TA45 600 aaKnown RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 KLHL35Q6PF15 583 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 TMTC3Q6ZXV5 915 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 TEX11Q8IYF3 940 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 PCYOX1LQ8NBM8 494 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 PPFIBP2Q8ND30 876 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 IL17REQ8NFR9 667 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 OR5AP2Q8NGF4 316 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 RNF128Q8TEB7 428 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 ZFAND2BQ8WV99 257 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 GTF3AQ92664 365 aaKnown RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 CMTM3Q96MX0 182 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 KRT12Q99456 494 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 LRRC61Q9BV99 259 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 UPF3AQ9H1J1 476 aaKnown RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 SH2D4AQ9H788 454 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 SDR39U1Q9NRG7 319 aaPredicted RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 PGAP2Q9UHJ9 254 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 WDR37Q9Y2I8 494 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 LYVE1Q9Y5Y7 322 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 SESN1Q9Y6P5 492 aa3.13□□□□□ -1.91
LINC01088-210ENST00000513153 ASTN2O75129 1339 aaPredicted RBP3.13□□□□□ -1.91
LINC01088-210ENST00000513153 FRMD3A2A2Y4 597 aa3.12□□□□□ -1.91
LINC01088-210ENST00000513153 RTL8CO15255 209 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms