RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 AKR1B10O60218 316 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 SLC4A1P02730 911 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 HMGCLP35914 325 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
SPCS3-204ENST00000513139 IFI35P80217 286 aaPredicted RBP13.5□□□□□ -0.25
SPCS3-204ENST00000513139 ZDHHC20Q5W0Z9 365 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
SPCS3-204ENST00000513139 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 CCNYQ8ND76 341 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 GRHL3Q8TE85 626 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 NACC2Q96BF6 587 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 TADA1Q96BN2 335 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 IMP4Q96G21 291 aaKnown RBP13.5□□□□□ -0.25
SPCS3-204ENST00000513139 INSM2Q96T92 566 aaPredicted RBP13.5□□□□□ -0.25
SPCS3-204ENST00000513139 DEF6Q9H4E7 631 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 ZBTB20Q9HC78 741 aaPredicted RBP13.5□□□□□ -0.25
SPCS3-204ENST00000513139 P4HTMQ9NXG6 502 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 NENFQ9UMX5 172 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 CFAP20Q9Y6A4 193 aaKnown RBP13.5□□□□□ -0.25
SPCS3-204ENST00000513139 COLEC10Q9Y6Z7 277 aa13.5□□□□□ -0.25
SPCS3-204ENST00000513139 SOWAHDA6NJG2 315 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 KCNK1O00180 336 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 ZNF749O43361 778 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 LDB2O43679 373 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 NDST3O95803 873 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 PYGMP11217 842 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 POLR2CP19387 275 aaPredicted RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 HLA-DPA1P20036 260 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 NDUFS1P28331 727 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 FOLR3P41439 243 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 CTSCP53634 463 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 GBE1Q04446 702 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 PPIDQ08752 370 aaKnown RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 SLC10A2Q12908 348 aaPredicted RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 AIMP2Q13155 320 aaKnown RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 PDK2Q15119 407 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 SLC18A3Q16572 532 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 HADHQ16836 314 aaKnown RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 B3GNTL1Q67FW5 361 aaPredicted RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 FCRL6Q6DN72 434 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 IGFL2Q6UWQ7 119 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 B4GALNT4Q76KP1 1039 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 NT5DC3Q86UY8 548 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 DDHD1Q8NEL9 900 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 OR2Y1Q8NGV0 311 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 RELTQ969Z4 430 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 PTERQ96BW5 349 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 FAF2Q96CS3 445 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 LURAP1Q96LR2 239 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 C12orf66Q96MD2 445 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 BAG1Q99933 345 aaPredicted RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 PACSIN1Q9BY11 444 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 PITPNM3Q9BZ71 974 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 WWP1Q9H0M0 922 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 TRABDQ9H4I3 376 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 IL26Q9NPH9 171 aa13.49□□□□□ -0.25
SPCS3-204ENST00000513139 GPN3Q9UHW5 284 aaPredicted RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 PTRH2Q9Y3E5 179 aaKnown RBP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 NIPBLQ6KC79 2804 aaeCLIP13.49□□□□□ -0.25
SPCS3-204ENST00000513139 MGAT4DA6NG13 374 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 GOLGA6L6A8MZA4 724 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 AURKAO14965 403 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 PRDX3P30048 256 aaKnown RBP13.48□□□□□ -0.25
SPCS3-204ENST00000513139 ARCN1P48444 511 aaKnown RBP13.48□□□□□ -0.25
SPCS3-204ENST00000513139 ZBTB17Q13105 803 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 MLIPQ5VWP3 458 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 RAD9BQ6WBX8 426 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 FJX1Q86VR8 437 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 TMTC1Q8IUR5 882 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 TMEM139Q8IV31 216 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 MAP7D3Q8IWC1 876 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 GPR135Q8IZ08 494 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 KCTD6Q8NC69 237 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 OR4E2Q8NGC2 313 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 ZNF830Q96NB3 372 aaPredicted RBP13.48□□□□□ -0.25
SPCS3-204ENST00000513139 TRAPPC9Q96Q05 1148 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 HS3ST6Q96QI5 342 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 SLX1AQ9BQ83 275 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 SLC25A51Q9H1U9 297 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 BPIFA1Q9NP55 256 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 ANAPC7Q9UJX3 599 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 HEBP2Q9Y5Z4 205 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 AP1M2Q9Y6Q5 423 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 CACNA1CQ13936 2221 aa13.48□□□□□ -0.25
SPCS3-204ENST00000513139 OR2AG2A6NM03 316 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 AGPSO00116 658 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 DDX3YO15523 660 aaKnown RBP13.47□□□□□ -0.25
SPCS3-204ENST00000513139 SLC35G4P0C7Q5 338 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 ST6GAL1P15907 406 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 ITGA9Q13797 1035 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 ZNF169Q14929 603 aaPredicted RBP13.47□□□□□ -0.25
SPCS3-204ENST00000513139 PCSK7Q16549 785 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 CYP2A13Q16696 494 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 LONRF2Q1L5Z9 754 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 RHBDD2Q6NTF9 364 aa13.47□□□□□ -0.25
SPCS3-204ENST00000513139 DUS1LQ6P1R4 473 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms