RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FAM90A13PP0C7W8 464 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 FAM90A24PP0C7X0 464 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 IGHV4-30-4P0DP06 118 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 FCGR1AP12314 374 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 DAOP14920 347 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 AKR1B1P15121 316 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 RAD52P43351 418 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 PSMC4P43686 418 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 LIG4P49917 911 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 HNRNPH2P55795 449 aaKnown RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 PPIL2Q13356 520 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 PKN2Q16513 984 aaKnown RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 MEP1AQ16819 746 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 TMEM266Q2M3C6 531 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 ASPRV1Q53RT3 343 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 BMP2KLQ5H9B9 411 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 ZSCAN25Q6NSZ9 544 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 ANKRD54Q6NXT1 300 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 C1QL2Q7Z5L3 287 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 MCEMP1Q8IX19 187 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 SCYL3Q8IZE3 742 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 RAET1EQ8TD07 263 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 WFIKKN2Q8TEU8 576 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 PRPF31Q8WWY3 499 aaKnown RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 ADAMTS14Q8WXS8 1223 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 MED30Q96HR3 178 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 CSF3RQ99062 836 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 SLF1Q9BQI6 1058 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 SRSF8Q9BRL6 282 aaKnown RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 RTN4RQ9BZR6 473 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 RWDD1Q9H446 243 aaPredicted RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 MAGIXQ9H6Y5 334 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 NOX4Q9NPH5 578 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 PAG1Q9NWQ8 432 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 NKIRAS2Q9NYR9 191 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 SIX4Q9UIU6 781 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 ZNF112Q9UJU3 913 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 ISY1Q9ULR0 285 aaKnown RBP4.15□□□□□ -1.75
HTT-210ENST00000512909 ZNF532Q9HCE3 1301 aa4.15□□□□□ -1.75
HTT-210ENST00000512909 IGLV5-37A0A075B6J1 123 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 C15orf62A8K5M9 175 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 SMAD9O15198 467 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 INSIG1O15503 277 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 PRKAB2O43741 272 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 OR2C1O95371 312 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 GH2P01242 217 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 ABCB1P08183 1280 aaPredicted RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 SSTR2P30874 369 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 HOXA11P31270 313 aaPredicted RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 ARRB2P32121 409 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 HMGCS2P54868 508 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 UBXN2AP68543 259 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 IRX3P78415 501 aaPredicted RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 KRTAP1-1Q07627 177 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 Q0VFX4 171 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 MYBPHQ13203 477 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 DHX34Q14147 1143 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 IRF3Q14653 427 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 EFNB3Q15768 340 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 HIST2H2BCQ6DN03 193 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 HIST2H2BDQ6DRA6 164 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 ANKRD23Q86SG2 305 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 ADGRA1Q86SQ6 560 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 MAP7D3Q8IWC1 876 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 RNF113BQ8IZP6 322 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 ZNF444Q8N0Y2 327 aaPredicted RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 OR8H2Q8N162 312 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 TTC30BQ8N4P2 665 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 ANKRD13CQ8N6S4 541 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 PCDH20Q8N6Y1 951 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 SYT2Q8N9I0 419 aaPredicted RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 HJURPQ8NCD3 748 aaPredicted RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 SDR42E1Q8WUS8 393 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 SNRNP27Q8WVK2 155 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 NEUROG1Q92886 237 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 TMEM19Q96HH6 336 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 ADGRG7Q96K78 797 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 SMC6Q96SB8 1091 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 FIZ1Q96SL8 496 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 DDOQ99489 341 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 MRPL1Q9BYD6 325 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 DCTPP1Q9H773 170 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.14□□□□□ -1.75
HTT-210ENST00000512909 ECHDC1Q9NTX5 307 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 SMARCAL1Q9NZC9 954 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 MORF4L1Q9UBU8 362 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 POLG2Q9UHN1 485 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 EXO1Q9UQ84 846 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 PTRH2Q9Y3E5 179 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 PCDHGA5Q9Y5G8 931 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.14□□□□□ -1.75
HTT-210ENST00000512909 LRRC37AA6NMS7 1700 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 GAKO14976 1311 aa4.14□□□□□ -1.75
HTT-210ENST00000512909 COL1A1P02452 1464 aaPredicted RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 ADAMTSL1Q8N6G6 1762 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 DENND3A2RUS2 1198 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 AGAP14A8MT82 685 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 RNF113AO15541 343 aaKnown RBP4.13□□□□□ -1.75
HTT-210ENST00000512909 KCNN4O15554 427 aa4.13□□□□□ -1.75
HTT-210ENST00000512909 BUD23O43709 281 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms