RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 KCNK4Q9NYG8 393 aa8.94□□□□□ -0.98
NR1I3-228ENST00000511676 NUDT4Q9NZJ9 180 aa8.94□□□□□ -0.98
NR1I3-228ENST00000511676 CNOT6Q9ULM6 557 aaKnown RBP8.94□□□□□ -0.98
NR1I3-228ENST00000511676 RAP2CQ9Y3L5 183 aa8.94□□□□□ -0.98
NR1I3-228ENST00000511676 OARD1Q9Y530 152 aa8.94□□□□□ -0.98
NR1I3-228ENST00000511676 FAM208BQ5VWN6 2430 aa8.94□□□□□ -0.98
NR1I3-228ENST00000511676 THADAQ6YHU6 1953 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 C1QTNF9BB2RNN3 333 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 BTN3A1O00481 513 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 EBAG9O00559 213 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CHUKO15111 745 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 GPR39O43194 453 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 SGTAO43765 313 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 PCDH8O95206 1070 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 F7P08709 466 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-228ENST00000511676 C1QTNF9P0C862 333 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 MTHFD2P13995 350 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 VCLP18206 1134 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 NDUFV2P19404 249 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 ITPKAP23677 461 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 WASP42768 502 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 GLRBP48167 497 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 SLC1A6P48664 564 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CCR5P51681 352 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 AFF3P51826 1226 aaKnown RBP8.93□□□□□ -0.98
NR1I3-228ENST00000511676 AP1S2P56377 157 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CDC16Q13042 620 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 PRKAA1Q13131 559 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 SGCGQ13326 291 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 PPP1R3AQ16821 1122 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 WSCD2Q2TBF2 565 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 ZNF658BQ4V348 819 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-228ENST00000511676 TCEAL6Q6IPX3 200 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 RFLNAQ6ZTI6 216 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 FRMD7Q6ZUT3 714 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 FAM47EQ6ZV65 393 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 GPSM1Q86YR5 675 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CPNE9Q8IYJ1 553 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 TCAIMQ8N3R3 496 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 AFAP1L2Q8N4X5 818 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 OXR1Q8N573 874 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CLDN19Q8N6F1 224 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 TP53I13Q8NBR0 393 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-228ENST00000511676 PDPRQ8NCN5 879 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 HM13Q8TCT9 377 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 UBTD2Q8WUN7 234 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 EEF1AKMT1Q8WVE0 214 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 DNASE2BQ8WZ79 361 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 GATA6Q92908 595 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 TCEAL3Q969E4 200 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 PTERQ96BW5 349 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 SEC16BQ96JE7 1060 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CCM2Q9BSQ5 444 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 TRIM54Q9BYV2 358 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 WDR26Q9H7D7 661 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 SLCO1B3Q9NPD5 702 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 PHPT1Q9NRX4 125 aaPredicted RBP8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CPSF2Q9P2I0 782 aaKnown RBP8.93□□□□□ -0.98
NR1I3-228ENST00000511676 DKK4Q9UBT3 224 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 VTI1BQ9UEU0 232 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 CD84Q9UIB8 345 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 RNF112Q9ULX5 631 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 LHX6Q9UPM6 363 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 ZFR2Q9UPR6 939 aaKnown RBP8.93□□□□□ -0.98
NR1I3-228ENST00000511676 INVSQ9Y283 1065 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 PRSS21Q9Y6M0 314 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 USH1CQ9Y6N9 552 aa8.93□□□□□ -0.98
NR1I3-228ENST00000511676 SLC5A10A0PJK1 596 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 IGLON5A6NGN9 336 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 GFYI3L273 518 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 RAD51BO15315 384 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 BCAT2O15382 392 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-228ENST00000511676 LATO43561 262 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 RNGTTO60942 597 aaKnown RBP8.92□□□□□ -0.98
NR1I3-228ENST00000511676 DNAJC6O75061 913 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 DCTN3O75935 186 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 CDK14O94921 469 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 HSPA4LO95757 839 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 MLYCDO95822 493 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 S100BP04271 92 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-228ENST00000511676 MYCLP1P12525 358 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-228ENST00000511676 GABRG2P18507 467 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 KELP23276 732 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 CCR7P32248 378 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 CA5AP35218 305 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 PIK3CGP48736 1102 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 HNMTP50135 292 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 NAGLUP54802 743 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 KIAA1024LP59773 190 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 IRX1P78414 480 aaPredicted RBP8.92□□□□□ -0.98
NR1I3-228ENST00000511676 SEMG2Q02383 582 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 DMPKQ09013 629 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 SETDB1Q15047 1291 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 PCBP2Q15366 365 aaKnown RBP eCLIP8.92□□□□□ -0.98
NR1I3-228ENST00000511676 TGFBIQ15582 683 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 ZSCAN26Q16670 478 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 CFAP157Q5JU67 520 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 ZNF678Q5SXM1 525 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 FAM91A1Q658Y4 838 aa8.92□□□□□ -0.98
NR1I3-228ENST00000511676 CGB2Q6NT52 195 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms