RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 PRKRIP1Q9H875 184 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 SMYD2Q9NRG4 433 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 PLK2Q9NYY3 685 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 IL36RNQ9UBH0 155 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 INSL5Q9Y5Q6 135 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 PTGDR2Q9Y5Y4 395 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 PSAT1Q9Y617 370 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 ZFP37Q9Y6Q3 630 aaPredicted RBP3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 SCINQ9Y6U3 715 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 PIAS3Q9Y6X2 628 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 CACNA1FO60840 1977 aa3.59□□□□□ -1.83
TOPBP1-208ENST00000511439 F8P00451 2351 aa3.59□□□□□ -1.84
TOPBP1-208ENST00000511439 ATMQ13315 3056 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 CSMD1Q96PZ7 3565 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 SPENQ96T58 3664 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 A0A1B0GVT2 93 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 PGPEP1LA6NFU8 196 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 IFNL4K9M1U5 179 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 SEC14L5O43304 696 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 ZBED4O75132 1171 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 SEC14L2O76054 403 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 SEC31AO94979 1220 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 MT-CYBP00156 380 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 NGFRP08138 427 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 GHRP10912 638 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 HLA-EP13747 358 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 NAGAP17050 411 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 ITGAXP20702 1163 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 AGAP20933 346 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 HOXD3P31249 432 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 CASP2P42575 452 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 GNAQP50148 359 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 UCNP55089 124 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 HDAC4P56524 1084 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 RPS3AP61247 264 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 Q0VFX4 171 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 FOXD4Q12950 439 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 KARSQ15046 597 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 ASIC2Q16515 512 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 ZNF585BQ52M93 769 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 FSCBQ5H9T9 825 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 BEND3Q5T5X7 828 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 LRRC8EQ6NSJ5 796 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 C4orf50Q6ZRC1 276 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 Q6ZTC4 211 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 TMEM179Q6ZVK1 233 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 DHX40Q8IX18 779 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 DCP1BQ8IZD4 617 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 PARP16Q8N5Y8 322 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 PRR26Q8N8Z3 221 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 MIGA1Q8NAN2 632 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 ANKRD52Q8NB46 1076 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 OTULINQ96BN8 352 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 NSUN4Q96CB9 384 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 NXPE2Q96DL1 559 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 BBS4Q96RK4 519 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 PLEKHF1Q96S99 279 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 PIP5K1AQ99755 562 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 NTPCRQ9BSD7 190 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 FTHL17Q9BXU8 183 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 LMAN1LQ9HAT1 526 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 CLK4Q9HAZ1 481 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 CYSLTR2Q9NS75 346 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 TMEM51Q9NW97 253 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 HIF1ANQ9NWT6 349 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 AATFQ9NY61 560 aaKnown RBP eCLIP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 ADD3Q9UEY8 706 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 INTS6Q9UL03 887 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 FZD10Q9ULW2 581 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 FAM96BQ9Y3D0 163 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 NFE2L3Q9Y4A8 694 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 LSM4Q9Y4Z0 139 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 DDX49Q9Y6V7 483 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 USP9YO00507 2555 aaPredicted RBP3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 LAMA1P25391 3075 aa3.58□□□□□ -1.84
TOPBP1-208ENST00000511439 IGHV4-28A0A0C4DH34 117 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 TTC36A6NLP5 189 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 LRRC53A6NM62 1247 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 KDM4EB2RXH2 506 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 ASAP2O43150 1006 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 ITM2AO43736 263 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 RGS11O94810 467 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 HOXB5P09067 269 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 SPARCP09486 303 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 SCG2P13521 617 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 ETFAP13804 333 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 SHMT1P34896 483 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 BSGP35613 385 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 NUDT6P53370 316 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 ATXN3P54252 364 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 RIPK4P57078 832 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 TMEM115Q12893 351 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 CTTNQ14247 550 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 SHBQ15464 509 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 CCNG2Q16589 344 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 SGO1Q5FBB7 561 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 SNX30Q5VWJ9 437 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 PHLPP2Q6ZVD8 1323 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 NEK10Q6ZWH5 1172 aa3.57□□□□□ -1.84
TOPBP1-208ENST00000511439 PXKQ7Z7A4 578 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms