RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LCN9Q8WX39 176 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 LPGAT1Q92604 370 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 RNF31Q96EP0 1072 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 CRELD1Q96HD1 420 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 CTRCQ99895 268 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 CARD6Q9BX69 1037 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 TSSK1BQ9BXA7 367 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 XKR8Q9H6D3 395 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 C20orf96Q9NUD7 363 aaPredicted RBP13.61□□□□□ -0.23
DDX41-212ENST00000511040 HRASLS2Q9NWW9 162 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 SLC39A1Q9NY26 324 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 TSR3Q9UJK0 312 aaKnown RBP13.61□□□□□ -0.23
DDX41-212ENST00000511040 SNX24Q9Y343 169 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 ZFHX4Q86UP3 3567 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 A0A087WV48 116 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 OR5K3A6NET4 321 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 EFCAB8A8MWE9 144 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 KLK10O43240 276 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 NIPSNAP2O75323 286 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 USP1O94782 785 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 APOA4P06727 396 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 PGAM1P18669 254 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 POLR2CP19387 275 aaPredicted RBP13.6□□□□□ -0.23
DDX41-212ENST00000511040 OGNP20774 298 aaKnown RBP13.6□□□□□ -0.23
DDX41-212ENST00000511040 RPS3P23396 243 aaKnown RBP eCLIP13.6□□□□□ -0.23
DDX41-212ENST00000511040 AOAHP28039 575 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 ACADLP28330 430 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 RPL21P46778 160 aaKnown RBP13.6□□□□□ -0.23
DDX41-212ENST00000511040 ABRQ12979 859 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 CTBP1Q13363 440 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 LONRF1Q17RB8 773 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 COL28A1Q2UY09 1125 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 ARMC3Q5W041 872 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 ANKS6Q68DC2 871 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 HIBCHQ6NVY1 386 aaPredicted RBP13.6□□□□□ -0.23
DDX41-212ENST00000511040 ARMC6Q6NXE6 501 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 KLHL35Q6PF15 583 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 OOSP2Q86WS3 158 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 LRRC6Q86X45 466 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 CILP2Q8IUL8 1156 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
DDX41-212ENST00000511040 CFAP61Q8NHU2 1237 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 CFAP36Q96G28 342 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 ZDHHC12Q96GR4 267 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 SNF8Q96H20 258 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 PPM1MQ96MI6 270 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 BIRC8Q96P09 236 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 SRMSQ9H3Y6 488 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 MVB12BQ9H7P6 319 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 FBXO6Q9NRD1 293 aaPredicted RBP13.6□□□□□ -0.23
DDX41-212ENST00000511040 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.6□□□□□ -0.23
DDX41-212ENST00000511040 PLAGL1Q9UM63 463 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 CDYLQ9Y232 598 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 ASF1AQ9Y294 204 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 TDRKHQ9Y2W6 561 aaKnown RBP13.6□□□□□ -0.23
DDX41-212ENST00000511040 PCDHGA7Q9Y5G6 932 aa13.6□□□□□ -0.23
DDX41-212ENST00000511040 CACNA1BQ00975 2339 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 NVLO15381 856 aaKnown RBP13.59□□□□□ -0.23
DDX41-212ENST00000511040 RAD51CO43502 376 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 SEC31AO94979 1220 aaKnown RBP13.59□□□□□ -0.23
DDX41-212ENST00000511040 S1PR4O95977 384 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 SLC1A2P43004 574 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 SH3BP2P78314 561 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 MPP1Q00013 466 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 TMED2Q15363 201 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 TGIF1Q15583 401 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 HSP90AA5PQ58FG0 334 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 DNTTIP2Q5QJE6 756 aaKnown RBP13.59□□□□□ -0.23
DDX41-212ENST00000511040 RNF187Q5TA31 235 aaPredicted RBP13.59□□□□□ -0.23
DDX41-212ENST00000511040 FBXO38Q6PIJ6 1188 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 PRSS42Q7Z5A4 293 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 SLC22A15Q8IZD6 547 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 BMPERQ8N8U9 685 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 OR52E1Q8NGJ3 308 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 ZFPM2Q8WW38 1151 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 ASZ1Q8WWH4 475 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 ZNF592Q92610 1267 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 TAAR9Q96RI9 348 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 TCF12Q99081 682 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 EBNA1BP2Q99848 306 aaKnown RBP13.59□□□□□ -0.23
DDX41-212ENST00000511040 DPH5Q9H2P9 285 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 TRIT1Q9H3H1 467 aaKnown RBP13.59□□□□□ -0.23
DDX41-212ENST00000511040 APMAPQ9HDC9 416 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 IARS2Q9NSE4 1012 aaKnown RBP13.59□□□□□ -0.23
DDX41-212ENST00000511040 GALPQ9UBC7 116 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 EPHA6Q9UF33 1036 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 CIDEBQ9UHD4 219 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 CHMP2BQ9UQN3 213 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 B3GALT1Q9Y5Z6 326 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 FAM169AQ9Y6X4 670 aa13.59□□□□□ -0.23
DDX41-212ENST00000511040 KMT2BQ9UMN6 2715 aaPredicted RBP13.58□□□□□ -0.24
DDX41-212ENST00000511040 IGHV5-51A0A0C4DH38 117 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 GSAPA4D1B5 854 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 B4E171 279 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 BTN3A3O00478 584 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 BTN3A1O00481 513 aa13.58□□□□□ -0.24
DDX41-212ENST00000511040 PFDN6O15212 129 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms