RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 GABREP78334 506 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 AMZ1Q400G9 498 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 CTSL3PQ5NE16 218 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 PTRHD1Q6GMV3 140 aaKnown RBP16.82■□□□□ 0.28
CLDND1-221ENST00000510541 CYB5D1Q6P9G0 228 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 USP53Q70EK8 1073 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 KCNMB4Q86W47 210 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 BPHLQ86WA6 291 aaPredicted RBP16.82■□□□□ 0.28
CLDND1-221ENST00000510541 KLHL6Q8WZ60 621 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 UBXN4Q92575 508 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 FGF11Q92914 225 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 CERS2Q96G23 380 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 C9orf72Q96LT7 481 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 DDA1Q9BW61 102 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 TBC1D10AQ9BXI6 508 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 CHRNA10Q9GZZ6 450 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 TSPYL1Q9H0U9 437 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 SEMA6CQ9H3T2 930 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 RDH14Q9HBH5 336 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 FBXO8Q9NRD0 319 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 C20orf96Q9NUD7 363 aaPredicted RBP16.82■□□□□ 0.28
CLDND1-221ENST00000510541 IMP3Q9NV31 184 aaKnown RBP16.82■□□□□ 0.28
CLDND1-221ENST00000510541 ZC3H7BQ9UGR2 993 aaKnown RBP16.82■□□□□ 0.28
CLDND1-221ENST00000510541 PSMD13Q9UNM6 376 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 SATB2Q9UPW6 733 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 SNX24Q9Y343 169 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 USP24Q9UPU5 2620 aa16.82■□□□□ 0.28
CLDND1-221ENST00000510541 FKBP9O95302 570 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 MATN4O95460 622 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 CBSLP0DN79 551 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 AMD1P17707 334 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 CBSP35520 551 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 ELK3P41970 407 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 SKIV2L2P42285 1042 aaKnown RBP16.81■□□□□ 0.28
CLDND1-221ENST00000510541 CYP4F3Q08477 520 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 C2orf54Q08AI8 447 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 BBS9Q3SYG4 887 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 LRRC8EQ6NSJ5 796 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 UNC5AQ6ZN44 842 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 CEP128Q6ZU80 1094 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 OTOAQ7RTW8 1153 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 OOSP2Q86WS3 158 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 RELL1Q8IUW5 271 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 FBXO39Q8N4B4 442 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 ZCCHC14Q8WYQ9 949 aaKnown RBP16.81■□□□□ 0.28
CLDND1-221ENST00000510541 NCSTNQ92542 709 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 CCDC74BQ96LY2 380 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 TEFMQ96QE5 360 aaKnown RBP16.81■□□□□ 0.28
CLDND1-221ENST00000510541 WDR83Q9BRX9 315 aaKnown RBP16.81■□□□□ 0.28
CLDND1-221ENST00000510541 ZNF768Q9H5H4 540 aaKnown RBP16.81■□□□□ 0.28
CLDND1-221ENST00000510541 NSMCE4AQ9NXX6 385 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 OR6C2Q9NZP2 312 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 WDFY3Q8IZQ1 3526 aa16.81■□□□□ 0.28
CLDND1-221ENST00000510541 CASC3O15234 703 aaKnown RBP16.8■□□□□ 0.28
CLDND1-221ENST00000510541 BRINP1O60477 761 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 ENO3P13929 434 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-221ENST00000510541 RBMS1P29558 406 aaKnown RBP16.8■□□□□ 0.28
CLDND1-221ENST00000510541 SHMT2P34897 504 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 CCNFP41002 786 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 SLC1A2P43004 574 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 KIF26BQ2KJY2 2108 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 SYTL3Q4VX76 610 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 HSP90AA5PQ58FG0 334 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 NKAIN2Q5VXU1 208 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 LDB1Q86U70 411 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-221ENST00000510541 SLC26A11Q86WA9 606 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 RASGRP3Q8IV61 690 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 IGDCC3Q8IVU1 814 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 BMPERQ8N8U9 685 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 FBXO15Q8NCQ5 510 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-221ENST00000510541 GSDMBQ8TAX9 411 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 MAGEC3Q8TD91 643 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 SLC41A2Q96JW4 573 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 FCRL4Q96PJ5 515 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 TRIM56Q9BRZ2 755 aaKnown RBP16.8■□□□□ 0.28
CLDND1-221ENST00000510541 RAB11FIP5Q9BXF6 653 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 ASPSCR1Q9BZE9 553 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 DPH1Q9BZG8 443 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 TRIT1Q9H3H1 467 aaKnown RBP16.8■□□□□ 0.28
CLDND1-221ENST00000510541 SYTL2Q9HCH5 934 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 DHRS7Q9Y394 339 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 LOXL2Q9Y4K0 774 aa16.8■□□□□ 0.28
CLDND1-221ENST00000510541 ZZEF1O43149 2961 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 URB1O60287 2271 aaKnown RBP16.79■□□□□ 0.28
CLDND1-221ENST00000510541 CTAGE15A4D2H0 777 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 TLCD2A6NGC4 264 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 CAPN5O15484 640 aaPredicted RBP16.79■□□□□ 0.28
CLDND1-221ENST00000510541 SPAG6O75602 509 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 CTAGE8P0CG41 777 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 CSTF2P33240 577 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLDND1-221ENST00000510541 PREPP48147 710 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 CLCN7P51798 805 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 EIF3BP55884 814 aaKnown RBP16.79■□□□□ 0.28
CLDND1-221ENST00000510541 MC2RQ01718 297 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 C16orf72Q14CZ0 275 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 KYNUQ16719 465 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 TTLL9Q3SXZ7 439 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 TEDDM1Q5T9Z0 273 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 UGT3A1Q6NUS8 523 aa16.79■□□□□ 0.28
CLDND1-221ENST00000510541 C8orf74Q6P047 294 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms