RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	SERPINA9	Q86WD7	417 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ARL14	Q8N4G2	192 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	OR6C4	Q8NGE1	309 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	CALML6	Q8TD86	181 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	LMX1A	Q8TE12	382 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	MFSD3	Q96ES6	412 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	PDXP	Q96GD0	296 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	LINC00615	Q96LM1	132 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	OR2M4	Q96R27	311 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	OCSTAMP	Q9BR26	566 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TIMM29	Q9BSF4	260 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	LRRC61	Q9BV99	259 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TRIM31	Q9BZY9	425 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	TMEM168	Q9H0V1	697 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	OR2AG1	Q9H205	316 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ADNP	Q9H2P0	1102 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	SUDS3	Q9H7L9	328 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	VPS37B	Q9H9H4	285 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	MOSPD1	Q9UJG1	213 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	ANAPC2	Q9UJX6	822 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	PNMA8B	Q9ULN7	279 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	DOLK	Q9UPQ8	538 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	MAD1L1	Q9Y6D9	718 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	RPS6KL1	Q9Y6S9	549 aa		10.09	□□□□□ -0.79
PTPN20-222	ENST00000509774	LY6G6E	A0A0G2JKS1	128 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	SLC35F4	A4IF30	521 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	OR5K4	A6NMS3	321 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	YY2	O15391	372 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	CD3EAP	O15446	510 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	VAPB	O95292	243 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	GP1BA	P07359	652 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	SLC2A4	P14672	509 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	ZNF7	P17097	686 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	WT1	P19544	449 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	NMBR	P28336	390 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	DEK	P35659	375 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	GNPDA1	P46926	289 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	ARCN1	P48444	511 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	CD97	P48960	835 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	POLD2	P49005	469 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	TERF1	P54274	439 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	ADAR	P55265	1226 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	CTBS	Q01459	385 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	PLOD1	Q02809	727 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	LONRF1	Q17RB8	773 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	BCL7A	Q4VC05	210 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	RNFT1	Q5M7Z0	435 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	SPANXN3	Q5MJ09	141 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	FNBP1L	Q5T0N5	605 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	RNF187	Q5TA31	235 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	ZNF449	Q6P9G9	518 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	WASH2P	Q6VEQ5	465 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	TAF8	Q7Z7C8	310 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	LRRC6	Q86X45	466 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	PIANP	Q8IYJ0	282 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	RBFA	Q8N0V3	343 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	BEND7	Q8N7W2	519 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	EIF1AD	Q8N9N8	165 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	AVL9	Q8NBF6	648 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	NANOS1	Q8WY41	292 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	BOC	Q9BWV1	1114 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	CLPB	Q9H078	707 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	MRPL40	Q9NQ50	206 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	WASH6P	Q9NQA3	447 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	CATSPERZ	Q9NTU4	200 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	UCKL1	Q9NWZ5	548 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	GRHL1	Q9NZI5	618 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	SLC2A6	Q9UGQ3	507 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	TEX264	Q9Y6I9	313 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774		U3KQA8	63 aa		10.08	□□□□□ -0.8
PTPN20-222	ENST00000509774	ZCWPW2	A0A1B0GU75	182 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	ITGA2B	P08514	1039 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	GSTA2	P09210	222 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	GIMD1	P0DJR0	217 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	OGN	P20774	298 aa	Known RBP	10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	AKT1	P31749	480 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	PLTP	P55058	493 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	GUCY2D	Q02846	1103 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	DMPK	Q09013	629 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	CUL1	Q13616	776 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	THOC5	Q13769	683 aa	Known RBP	10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	BBS9	Q3SYG4	887 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	NEPRO	Q6NW34	567 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	DOK6	Q6PKX4	331 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	TMEM220	Q6QAJ8	160 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	CHST15	Q7LFX5	561 aa	Predicted RBP	10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	GALNT7	Q86SF2	657 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	TRIM74	Q86UV6	250 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	AMZ2	Q86W34	360 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	VWA5B2	Q8N398	1253 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	RASGEF1A	Q8N9B8	481 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	NOA1	Q8NC60	698 aa	Known RBP	10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	FAM46D	Q8NEK8	389 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	SSC4D	Q8WTU2	575 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	GRAMD1A	Q96CP6	724 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	CARD6	Q9BX69	1037 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	TSSK1B	Q9BXA7	367 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	ABCG4	Q9H172	646 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	DPH5	Q9H2P9	285 aa		10.07	□□□□□ -0.8
PTPN20-222	ENST00000509774	TCEAL2	Q9H3H9	227 aa	Predicted RBP	10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms