RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SUPT3HB4E1H0 165 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 CLOCKO15516 846 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SNX2O60749 519 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SOCS5O75159 536 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SUPT3HO75486 399 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SLC22A3O75751 556 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 ESRRBO95718 433 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 LDLRP01130 860 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SERPINA4P29622 427 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 EEF1DP29692 281 aaKnown RBP10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 WEE1P30291 646 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 CAPGP40121 348 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 MAPK8P45983 427 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 GSK3BP49841 420 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 GRB7Q14451 532 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 FXNQ16595 210 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 CYP51A1Q16850 503 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 EML3Q32P44 896 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 LRRC73Q5JTD7 316 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 TMEM215Q68D42 235 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 DPY19L3Q6ZPD9 716 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 Q6ZVU0 165 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 ADGRG2Q8IZP9 1017 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 C12orf76Q8N812 135 aaPredicted RBP10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SIDT2Q8NBJ9 832 aaKnown RBP10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 ST13P5Q8NFI4 369 aaPredicted RBP10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 OR56A4Q8NGH8 313 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 ITFG1Q8TB96 612 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SORCS1Q8WY21 1168 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 LRCH3Q96II8 777 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 LRRC3BQ96PB8 259 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 PLEKHG4BQ96PX9 1271 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 SLC39A3Q9BRY0 314 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 OCEL1Q9H607 264 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 ZDHHC6Q9H6R6 413 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 TBCCD1Q9NVR7 557 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 TMEM9Q9P0T7 183 aa10.83□□□□□ -0.68
SH3RF1-203ENST00000508685 FAM234BA2RU67 622 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 LRRC14BA6NHZ5 514 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 DLGAP1O14490 977 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 TULP3O75386 442 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 SIX3O95343 332 aaPredicted RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ENO2P09104 434 aaPredicted RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 HNRNPA1P09651 372 aaKnown RBP eCLIP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 PABPC1P11940 636 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 PKMP14618 531 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 HOXB6P17509 224 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 RANBP1P43487 201 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CSNK1DP48730 415 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 SNRPD1P62314 119 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ERVK-8P63133 956 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CDKN3Q16667 212 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 FBXO48Q5FWF7 155 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ISLR2Q6UXK2 745 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 METTL3Q86U44 580 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ADIPOR2Q86V24 386 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 GPR180Q86V85 440 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 DPP10Q8N608 796 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 FAM210AQ96ND0 272 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 TUBB1Q9H4B7 451 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 IL1RL2Q9HB29 575 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 PREBQ9HCU5 417 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 IL26Q9NPH9 171 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ZNF639Q9UID6 485 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 FAF1Q9UNN5 650 aaPredicted RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 FADS3Q9Y5Q0 445 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 OAS3Q9Y6K5 1087 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 SLC30A1Q9Y6M5 507 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 GBF1Q92538 1859 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 TCRBV5S2A0A599 114 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CDC7O00311 574 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ACOX3O15254 700 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 INPP4BO15327 924 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 VPS26AO75436 327 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 UGT2B4P06133 528 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 LINC00032P0C843 101 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ARSAP15289 507 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 BPIP17213 487 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 RPS9P46781 194 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 POLR2JP52435 117 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 EMP3P54852 163 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ECT2LQ008S8 904 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 EMX2Q04743 252 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 LIPEQ05469 1076 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CACNG1Q06432 222 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 TSNQ15631 228 aaKnown RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 XKR7Q5GH72 579 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 ELMSAN1Q6PJG2 1045 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 TMC5Q6UXY8 1006 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 RTL10Q7L3V2 364 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 GALNT13Q8IUC8 556 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CLVS1Q8IUQ0 354 aaPredicted RBP10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CHST14Q8NCH0 376 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 GRIN3AQ8TCU5 1115 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 CD200R1Q8TD46 325 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 TMIGD2Q96BF3 282 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 DOK1Q99704 481 aa10.82□□□□□ -0.68
SH3RF1-203ENST00000508685 BOCQ9BWV1 1114 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms