RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 RANGRFQ9HD47 186 aaPredicted RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 GPR108Q9NPR9 543 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC22A11Q9NSA0 550 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 AGPAT5Q9NUQ2 364 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 HYPKQ9NX55 129 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 BARHL2Q9NY43 387 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 PLK2Q9NYY3 685 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 MOCS1Q9NZB8 636 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 CHMP5Q9NZZ3 219 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 KIAA1257Q9ULG3 409 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 A4GNTQ9UNA3 340 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 EXO1Q9UQ84 846 aaKnown RBP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 KIAA1217Q5T5P2 1943 aa4.23□□□□□ -1.73
SMARCA5-202ENST00000508573 NCAPD2Q15021 1401 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 WDR91A4D1P6 747 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 C17orf100A8MU93 164 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 HSBP1L1C9JCN9 74 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 XPO1O14980 1071 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CHADO15335 359 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 PEX1O43933 1283 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 NDUFS3O75489 264 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TOM1L1O75674 476 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 AGFG2O95081 481 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 SERPINA3P01011 423 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 IVLP07476 585 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 YES1P07947 543 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 SBK2P0C263 348 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 GNAZP19086 355 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 NR1D1P20393 614 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 DRD1P21728 446 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CPN2P22792 545 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 GCSHP23434 173 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 RBL1P28749 1068 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TKTP29401 623 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 UQCRC1P31930 480 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 OTX2P32243 289 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CA8P35219 290 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC11A1P49279 550 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 HTR6P50406 440 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 GATMP50440 423 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CLCN3P51790 818 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF134P52741 427 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 MTTPP55157 894 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC8A3P57103 927 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TAS2R40P59535 323 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 SHC2P98077 582 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ECT2LQ008S8 904 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CUL1Q13616 776 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 FGFBP1Q14512 234 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 VWC2Q2TAL6 325 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 KLHL26Q53HC5 615 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 FSCBQ5H9T9 825 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CXorf66Q5JRM2 361 aaPredicted RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 RARS2Q5T160 578 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 GCNT6Q5T4J0 391 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 KRT39Q6A163 491 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TMEM211Q6ICI0 200 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 GJB7Q6PEY0 223 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF788Q6ZQV5 615 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 C11orf57Q6ZUT1 292 aaPredicted RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ZDHHC21Q8IVQ6 265 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 C11orf44Q8N8P7 122 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 C11orf65Q8NCR3 313 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TMEM185AQ8NFB2 350 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TRIM58Q8NG06 486 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 LIPHQ8WWY8 451 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ANKRD7Q92527 254 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ARHGEF26Q96DR7 871 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 PABPC5Q96DU9 382 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TRMT61AQ96FX7 289 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 MARS2Q96GW9 593 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 KLHL32Q96NJ5 620 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 FCRL4Q96PJ5 515 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 PIGQQ9BRB3 760 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 LLPHQ9BRT6 129 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 NTMT1Q9BV86 223 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ZNF416Q9BWM5 594 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 NPLQ9BXD5 320 aaPredicted RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 TRPV6Q9H1D0 765 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 EXO5Q9H790 373 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CXorf36Q9H7Y0 433 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 RNPEPL1Q9HAU8 725 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 KCNK13Q9HB14 408 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 CPNE5Q9HCH3 593 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 SLC6A13Q9NSD5 602 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 FBXO28Q9NVF7 368 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 MTMR4Q9NYA4 1195 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 OR6C3Q9NZP0 311 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 OR6C2Q9NZP2 312 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 ARPP21Q9UBL0 812 aaPredicted RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 DDX25Q9UHL0 483 aaKnown RBP4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 KCNE5Q9UJ90 142 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 VPS4AQ9UN37 437 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 SHOC2Q9UQ13 582 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 MFHAS1Q9Y4C4 1052 aa4.22□□□□□ -1.73
SMARCA5-202ENST00000508573 GAKO14976 1311 aa4.21□□□□□ -1.73
SMARCA5-202ENST00000508573 TRAV6A0A075B6T7 132 aa4.21□□□□□ -1.74
SMARCA5-202ENST00000508573 A0A0B4J293 547 aa4.21□□□□□ -1.74
SMARCA5-202ENST00000508573 C17orf102A2RUQ5 167 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms